RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZFP14Q9HCL3 533 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 KLHL42Q9P2K6 505 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 MMP12P39900 470 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 OPRD1P41143 372 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 DCDC1P59894 354 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 NAA20P61599 178 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 CUL3Q13618 768 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 HNRNPA1L2Q32P51 320 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 ARHGAP24Q8N264 748 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 RP9Q8TA86 221 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 HMGCLL1Q8TB92 370 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 DTX3LQ8TDB6 740 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 TWIST2Q8WVJ9 160 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 FAM129BQ96TA1 746 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 RIOK2Q9BVS4 552 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 SMOXQ9NWM0 555 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 KCTD5Q9NXV2 234 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 NKX1-2Q9UD57 310 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 SUN2Q9UH99 717 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 KIF26AQ9ULI4 1882 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 ATP6AP2A0A1C7CYW4 349 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 UBDO15205 165 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 TAPBPO15533 448 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 FFAR2O15552 330 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 SPINT1O43278 529 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 ATP6AP2O75787 350 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 CCND1P24385 295 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 KPNB1Q14974 876 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 HERC3Q15034 1050 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 PCBP2Q15366 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX41-201ENST00000330503 KHDC1Q4VXA5 237 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 HENMT1Q5T8I9 393 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 LIPIQ6XZB0 460 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 DET1Q7L5Y6 550 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 ARRDC3Q96B67 414 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 FAM161BQ96MY7 647 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 MYADMQ96S97 322 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 FAM126AQ9BYI3 521 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 AKTIPQ9H8T0 292 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 NFKBIL1Q9UBC1 381 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 HCN2Q9UL51 889 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 PPM1HQ9ULR3 514 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 ITM2BQ9Y287 266 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 L3MBTL1Q9Y468 752 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 OARD1Q9Y530 152 aa16.7■□□□□ 0.26
DDX41-201ENST00000330503 MUC22E2RYF6 1773 aaPredicted RBP16.7■□□□□ 0.26
DDX41-201ENST00000330503 EDDM13A0A1B0GTR0 161 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 FADS2P1A8MWK0 482 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 PIP5K1BO14986 540 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 SGTAO43765 313 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 ATP1B2P14415 290 aaPredicted RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 AOAHP28039 575 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 CYLC2Q14093 348 aaPredicted RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 ZNF234Q14588 700 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 CRY1Q16526 586 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 PHKG1Q16816 387 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 FRA10AC1Q70Z53 315 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 PDPRQ8NCN5 879 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 TMEM245Q9H330 911 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 FBRSL1Q9HCM7 1045 aaKnown RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 TIMM22Q9Y584 194 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 PLXNA2O75051 1894 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 COL4A3Q01955 1670 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 TCF20Q9UGU0 1960 aaKnown RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 RAD51BO15315 384 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 MTX2O75431 263 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 ESRRBO95718 433 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 MLYCDO95822 493 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 PRNPP04156 253 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 OR56A5P0C7T3 313 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 CBSLP0DN79 551 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 CBSP35520 551 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 RUNX3Q13761 415 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 GRM2Q14416 872 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 GBX1Q14549 363 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 ZNF648Q5T619 568 aaPredicted RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 PGM2L1Q6PCE3 622 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 SUGP1Q8IWZ8 645 aaKnown RBP16.69■□□□□ 0.26
DDX41-201ENST00000330503 TRAM1L1Q8N609 369 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 TERB1Q8NA31 727 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 PANX3Q96QZ0 392 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 GIMAP2Q9UG22 337 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 SLC7A8Q9UHI5 535 aa16.69■□□□□ 0.26
DDX41-201ENST00000330503 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 CHUKO15111 745 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 GPC4O75487 556 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 LINC00032P0C843 101 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 NFKBIAP25963 317 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 GJA4P35212 333 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 PTK2BQ14289 1009 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms