RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	MMAA	Q8IVH4	418 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	BEND7	Q8N7W2	519 aa	Predicted RBP	11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	FEM1A	Q9BSK4	669 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	LRTM1	Q9HBL6	345 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	HCFC1R1	Q9NWW0	138 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	PAIP2B	Q9ULR5	123 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	CCDC189	A1A4V9	331 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	PPP6C	O00743	305 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	TYR	P14679	529 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	ARSA	P15289	507 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	IMPDH1	P20839	514 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	RGR	P47804	291 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	POLD2	P49005	469 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	STC1	P52823	247 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	OCA2	Q04671	838 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	LIPE	Q05469	1076 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	LRRC66	Q68CR7	880 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	CES5A	Q6NT32	575 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	RANBP10	Q6VN20	620 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	HEPH	Q9BQS7	1158 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	RNF38	Q9H0F5	515 aa		11.69	□□□□□ -0.54
DDR1-223	ENST00000324771	PHIP	Q8WWQ0	1821 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	LINC00854	A0A1B0GVQ3	168 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	GRK3	P35626	688 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	ETV4	P43268	484 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	IDH2	P48735	452 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CLK1	P49759	484 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC16A1	P53985	500 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	EMC10	Q5UCC4	262 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	ZNF534	Q76KX8	674 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	BNIPL	Q7Z465	357 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	DSG4	Q86SJ6	1040 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TMEM132C	Q8N3T6	1108 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	FAM47B	Q8NA70	645 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	OR10A6	Q8NH74	314 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC45A3	Q96JT2	553 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CEP19	Q96LK0	163 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TMEM74	Q96NL1	305 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	RTP3	Q9BQQ7	232 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	RIOK2	Q9BVS4	552 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	OR2AG1	Q9H205	316 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TDP1	Q9NUW8	608 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	KCTD5	Q9NXV2	234 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	MATN2	O00339	956 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SMAD6	O43541	496 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	LDB2	O43679	373 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	VPS4B	O75351	444 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SEC24A	O95486	1093 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	RPS6KA3	P51812	740 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	HERVK_113	P63132	956 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CAP1	Q01518	475 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	MAD2L1	Q13257	205 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	GLYAT	Q6IB77	296 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TXNDC11	Q6PKC3	985 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TIFAB	Q6ZNK6	161 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	DPY19L3	Q6ZPD9	716 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	PGAM4	Q8N0Y7	254 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	RTP4	Q96DX8	246 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	PSKH2	Q96QS6	385 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	ERVK-6	Q9BXR3	956 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC7A5P2	Q9GIP4	190 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CNOT6	Q9ULM6	557 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	EPN2	O95208	641 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	ZBTB11	O95625	1053 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	GBA	P04062	536 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CDH2	P19022	906 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	YAP1	P46937	504 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CCDC85B	Q15834	202 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	PLEKHG6	Q3KR16	790 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	FGD3	Q5JSP0	725 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	CHST15	Q7LFX5	561 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	GPR141	Q7Z602	305 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	OFCC1	Q8IZS5	231 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	TBC1D19	Q8N5T2	526 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	OR8D1	Q8WZ84	308 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC22A12	Q96S37	553 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	LINC00597	Q9H2U6	94 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	C11orf49	Q9H6J7	331 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SGK2	Q9HBY8	427 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	PRKAG3	Q9UGI9	489 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	PRPF19	Q9UMS4	504 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	NUP214	P35658	2090 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	SEC16A	O15027	2179 aa		11.68	□□□□□ -0.54
DDR1-223	ENST00000324771	C16orf96	A6NNT2	1141 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	PDLIM1	O00151	329 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	LEFTY2	O00292	366 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	S1PR4	O95977	384 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	PCCB	P05166	539 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	OGN	P20774	298 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC6A4	P31645	630 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	ACTR3	P61158	418 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	LSM3	P62310	102 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	TP53BP2	Q13625	1128 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	RABL3	Q5HYI8	236 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	PPP4R4	Q6NUP7	873 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	TMEM214	Q6NUQ4	689 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	OR2T12	Q8NG77	320 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	OR14C36	Q8NHC7	312 aa		11.67	□□□□□ -0.54
DDR1-223	ENST00000324771	ACD	Q96AP0	544 aa		11.67	□□□□□ -0.54

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