RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RPS18P62269 152 aaKnown RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SLC25A11Q02978 314 aaKnown RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SEL1L2Q5TEA6 688 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 NKAIN2Q5VXU1 208 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 OLFML1Q6UWY5 402 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CNPY4Q8N129 248 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CCHCR1Q8TD31 782 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 ALG3Q92685 438 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 DMRTA2Q96SC8 542 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 TRIM62Q9BVG3 475 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 DPEP2Q9H4A9 486 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 ARFGAP3Q9NP61 516 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 FAM114A2Q9NRY5 505 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SNX7Q9UNH6 387 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 L3MBTL1Q9Y468 752 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CUBNO60494 3623 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 PCM1Q15154 2024 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 C3orf70A6NLC5 250 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 C2CD4BA6NLJ0 364 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SMAPO00193 183 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 HTRA2O43464 458 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SRGAP2O75044 1071 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 HOXC4P09017 264 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 ADRB3P13945 408 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 KELP23276 732 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 MPSTP25325 297 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SLC11A2P49281 568 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SGSHP51688 502 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CAV1Q03135 178 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 PRKD1Q15139 912 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CCNG2Q16589 344 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 DNAJC24Q6P3W2 148 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 TMCO3Q6UWJ1 677 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CPA5Q8WXQ8 436 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 SDCCAG3Q96C92 435 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 GPATCH1Q9BRR8 931 aaKnown RBP6.54□□□□□ -1.36
CSTF3-201ENST00000323959 DUSP16Q9BY84 665 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 FUT8Q9BYC5 575 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 RAB17Q9H0T7 212 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF446Q9NWS9 450 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 LPAR3Q9UBY5 353 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 ANAPC7Q9UJX3 599 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 IGLON5A6NGN9 336 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 HHLA1C9JL84 531 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 TOXO94900 526 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 MLYCDO95822 493 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 TIMP2P16035 220 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 HTR7P34969 479 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 STK19P49842 368 aaPredicted RBP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 NAP1L1P55209 391 aaKnown RBP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 SLC6A3Q01959 620 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ATP1A4Q13733 1029 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 PCBP2Q15366 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 DUPD1Q68J44 220 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 C8orf74Q6P047 294 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ENPP7Q6UWV6 458 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 MMS22LQ6ZRQ5 1243 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 CEP128Q6ZU80 1094 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 STRADAQ7RTN6 431 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 HDXQ7Z353 690 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 NLRP8Q86W28 1048 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 LILRB4Q8NHJ6 448 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 GRK7Q8WTQ7 553 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 CNPY3Q9BT09 278 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 GSDMCQ9BYG8 508 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 TXLNGYQ9BZA5 131 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 DPEP3Q9H4B8 488 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ACP6Q9NPH0 428 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 KCNJ16Q9NPI9 418 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 NUDT5Q9UKK9 219 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 TSPAN16Q9UKR8 245 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 A8MXQ7 604 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 PRAMEF2O60811 474 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 FGF1P05230 155 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 CD53P19397 219 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ECHS1P30084 290 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 L1CAMP32004 1257 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 PDK2Q15119 407 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 TEX35Q5T0J7 233 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
CSTF3-201ENST00000323959 ALS2CLQ60I27 953 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 CARNMT1Q8N4J0 409 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 LRFN5Q96NI6 719 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 CPXM1Q96SM3 734 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 EPS8L2Q9H6S3 715 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 WHRNQ9P202 907 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 HMGXB4Q9UGU5 601 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 USP3Q9Y6I4 520 aa6.53□□□□□ -1.36
CSTF3-201ENST00000323959 DAB1O75553 588 aa6.52□□□□□ -1.37
CSTF3-201ENST00000323959 CTSLP07711 333 aa6.52□□□□□ -1.37
CSTF3-201ENST00000323959 KRT3P12035 628 aa6.52□□□□□ -1.37
CSTF3-201ENST00000323959 HSPA9P38646 679 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms