RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RECQL5O94762 991 aaPredicted RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 CDK14O94921 469 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 C6P13671 934 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 FOXA1P55317 472 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 SPDYAQ5MJ70 313 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 PIP5KL1Q5T9C9 394 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 KIAA1211LQ6NV74 962 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 MTSS1LQ765P7 747 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 DTD2Q96FN9 168 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 P2RY13Q9BPV8 354 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 STN1Q9H668 368 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 GEMIN8Q9NWZ8 242 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 NFKBIL1Q9UBC1 381 aaPredicted RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 CNOT6Q9ULM6 557 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 TMEM202A6NGA9 273 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 PRDX3P30048 256 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 SERPINB5P36952 375 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 CTSCP53634 463 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 CKAP5Q14008 2032 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 LSM12Q3MHD2 195 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 TMEM198Q66K66 360 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 TRIM74Q86UV6 250 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 SUGP1Q8IWZ8 645 aaKnown RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 FBXO27Q8NI29 283 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 TRPC4APQ8TEL6 797 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 BTN2A2Q8WVV5 523 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 KCNA7Q96RP8 456 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 ZSCAN5AQ9BUG6 496 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 SEMA4BQ9NPR2 832 aaPredicted RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 LATS2Q9NRM7 1088 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.14■□□□□ 0.49
USP39-201ENST00000323701 DOCK9Q9BZ29 2069 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 C2CD4DB7Z1M9 353 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 MID1O15344 667 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 RASSF9O75901 435 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 AOAHP28039 575 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 FAM91A1Q658Y4 838 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 DDHD1Q8NEL9 900 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 KLHL29Q96CT2 875 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 SLC6A17Q9H1V8 727 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 SLC40A1Q9NP59 571 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 TCF7L2Q9NQB0 619 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 CD274Q9NZQ7 290 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 COL6A3P12111 3177 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 KRT87PA6NCN2 255 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 SYCE1LA8MT33 242 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 H0Y858 1186 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 RPS17P08708 135 aaKnown RBP18.13■□□□□ 0.49
USP39-201ENST00000323701 NFKBIAP25963 317 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 CTHP32929 405 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 CPA2P48052 419 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 TAS2R38P59533 333 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 SATB1Q01826 763 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 BTKQ06187 659 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 HSPA14Q0VDF9 509 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 ZNF284Q2VY69 593 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 UGT3A2Q3SY77 523 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 MBOAT1Q6ZNC8 495 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 RASGEF1AQ8N9B8 481 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 GLYATL1Q969I3 302 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 UTP4Q969X6 686 aaKnown RBP18.13■□□□□ 0.49
USP39-201ENST00000323701 HEBP1Q9NRV9 189 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 TXLNGQ9NUQ3 528 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 EIF2B4Q9UI10 523 aaKnown RBP18.13■□□□□ 0.49
USP39-201ENST00000323701 CD207Q9UJ71 328 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 ZNF225Q9UK10 706 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 PTGDR2Q9Y5Y4 395 aa18.13■□□□□ 0.49
USP39-201ENST00000323701 NUMA1Q14980 2115 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 MYO10Q9HD67 2058 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 SPECC1L-ADORA2AF8WAN1 911 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 SDHDO14521 159 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 GUCA1CO95843 209 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 ENO1P06733 434 aaKnown RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 NCF2P19878 526 aaPredicted RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 DGKAP23743 735 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 CREB5Q02930 508 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 GALNT1Q10472 559 aaPredicted RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 CAMK2GQ13555 558 aaPredicted RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 DTX3LQ8TDB6 740 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 PPP1R16AQ96I34 528 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 HDAC8Q9BY41 377 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 MKRN2Q9H000 416 aaKnown RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 ARHGEF3Q9NR81 526 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 FAM8A1Q9UBU6 413 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 PCTPQ9UKL6 214 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 G3BP2Q9UN86 482 aaKnown RBP18.12■□□□□ 0.49
USP39-201ENST00000323701 CDYLQ9Y232 598 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 FADS3Q9Y5Q0 445 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 VCANP13611 3396 aa18.12■□□□□ 0.49
USP39-201ENST00000323701 RGSL1A5PLK6 1076 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 PSMD11O00231 422 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 CCDC22O60826 627 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 EGFP01133 1207 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 OR56A5P0C7T3 313 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 POU3F3P20264 500 aaPredicted RBP18.11■□□□□ 0.49
USP39-201ENST00000323701 CLCQ05315 142 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 ELP6Q0PNE2 266 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 KRT72Q14CN4 511 aa18.11■□□□□ 0.49
USP39-201ENST00000323701 LRIT3Q3SXY7 679 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms