RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF846Q147U1 533 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 PSMD5Q16401 504 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 SV2CQ496J9 727 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 LRRC8DQ7L1W4 858 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 AQP12AQ8IXF9 295 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 OR6K2Q8NGY2 324 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 BARD1Q99728 777 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ASPSCR1Q9BZE9 553 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 MAGEE1Q9HCI5 957 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 GNPTGQ9UJJ9 305 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CNOT11Q9UKZ1 510 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 H0Y626 953 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 TRIM16O95361 564 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 MYL3P08590 195 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 RAPSNQ13702 412 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF235Q14590 738 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 NPTX1Q15818 432 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF648Q5T619 568 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 CILP2Q8IUL8 1156 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 TTC39CQ8N584 583 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 OR13F1Q8NGS4 319 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FAR1Q8WVX9 515 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 TSSK3Q96PN8 268 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ZBED2Q9BTP6 218 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 TDRD1Q9BXT4 1180 aaKnown RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 RNF38Q9H0F5 515 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 RUBCNLQ9H714 662 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 CARS2Q9HA77 564 aaKnown RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 RIC8BQ9NVN3 520 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ARMC1Q9NVT9 282 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 NUMA1Q14980 2115 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 CDH23Q9H251 3354 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 KRT87PA6NCN2 255 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 NCAM2O15394 837 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ABCB7O75027 752 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 KRT8P05787 483 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 PFKLP17858 780 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 PRKG2Q13237 762 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FAM45BPQ6NSW5 357 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 SYVN1Q86TM6 617 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FAM217AQ8IXS0 508 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 SCML4Q8N228 414 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FAM83FQ8NEG4 500 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 ZMIZ2Q8NF64 920 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 FAM45AQ8TCE6 357 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 TRUB1Q8WWH5 349 aaKnown RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 C11orf84Q9BUA3 381 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-201ENST00000318607 IKZF3Q9UKT9 509 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 MCM3APO60318 1980 aa14.04□□□□□ -0.16
PABPC1-201ENST00000318607 GPR182O15218 404 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ECI2O75521 394 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 UGT2B4P06133 528 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 HRH2P25021 359 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CCDC85BQ15834 202 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 USP41Q3LFD5 358 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ADPRMQ3LIE5 342 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 OR4K2Q8NGD2 314 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 SMOC2Q9H3U7 446 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ARID1BQ8NFD5 2236 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 NINQ8N4C6 2090 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 A0A1W2PP18 115 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ASNA1O43681 348 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CD4P01730 458 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 FCGR1AP12314 374 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CRHBPP24387 322 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 POU1F1P28069 291 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 TTKP33981 857 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 BNIP2Q12982 314 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 SEMA3AQ14563 771 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CPSF6Q16630 551 aaKnown RBP eCLIP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ALFQ53S48 1182 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 INTS11Q5TA45 600 aaKnown RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 OR2T11Q8NH01 316 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 UTP15Q8TED0 518 aaKnown RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 SLC47A1Q96FL8 570 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CHCHD6Q9BRQ6 235 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ZBTB20Q9HC78 741 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 FARSBQ9NSD9 589 aaKnown RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 FAM118AQ9NWS6 357 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 VAPAQ9P0L0 249 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 LEF1Q9UJU2 399 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 FBXO9Q9UK97 447 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-201ENST00000318607 SOCS7O14512 581 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 SULT1C4O75897 302 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 ANXA6P08133 673 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 IDO1P14902 403 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 BLOC1S3Q6QNY0 202 aa14.03□□□□□ -0.16
PABPC1-201ENST00000318607 CCDC80Q76M96 950 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms