RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ARL2P36404 184 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 PRIM2P49643 509 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 AKR1D1P51857 326 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CREB5Q02930 508 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF284Q2VY69 593 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 RFX4Q33E94 735 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF789Q5FWF6 425 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 PPP2R2DQ66LE6 453 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 XRRA1Q6P2D8 792 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TIFABQ6ZNK6 161 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 REPS2Q8NFH8 660 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 OR8H1Q8NGG4 311 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TRIM63Q969Q1 353 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ACDQ96AP0 544 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 OR52E6Q96RD3 313 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ASB7Q9H672 318 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 GALPQ9UBC7 116 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ARID1BQ8NFD5 2236 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 RRN3P2A6NIE6 340 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TBKBP1A7MCY6 615 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MITFO75030 526 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ARIH2O95376 493 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MZF1P28698 734 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 GRK4P32298 578 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 HMGCS1Q01581 520 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 DSC2Q02487 901 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SMARCB1Q12824 385 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TUBB3Q13509 450 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 NDUFA5Q16718 116 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SLC25A52Q3SY17 297 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SV2CQ496J9 727 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 NHSL2Q5HYW2 709 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 C10orf120Q5SQS8 335 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SULT1C3Q6IMI6 304 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM45BPQ6NSW5 357 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TRNP1Q6NT89 227 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 C15orf39Q6ZRI6 1047 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 GPRIN3Q6ZVF9 776 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SPATA2LQ8IUW3 424 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 HS6ST3Q8IZP7 471 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 KDM1BQ8NB78 822 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 UXS1Q8NBZ7 420 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TRUB1Q8WWH5 349 aaKnown RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ATL1Q8WXF7 558 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TFAP2CQ92754 450 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF597Q96LX8 424 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF347Q96SE7 839 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 IL12RB2Q99665 862 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SEMA3CQ99985 751 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 XYLT2Q9H1B5 865 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SP140LQ9H930 580 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 GLOD4Q9HC38 313 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TIGARQ9NQ88 270 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ERVK13-1Q9NX77 482 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CLEC4AQ9UMR7 237 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CPQQ9Y646 472 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 TIAM2Q8IVF5 1701 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MYH9P35579 1960 aaKnown RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 OR6C70A6NIJ9 312 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 BTN3A3O00478 584 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 NCAM2O15394 837 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 B4GALT4O60513 344 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CNTN5O94779 1100 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SERPINA1P01009 418 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 POMCP01189 267 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 DDX5P17844 614 aaKnown RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CAPN3P20807 821 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CCND3P30281 292 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ABATP80404 500 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 HERC3Q15034 1050 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 DPYSL2Q16555 572 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM174BQ3ZCQ3 159 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF648Q5T619 568 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM131AQ6UXB0 335 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ITIH5Q86UX2 942 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CIR1Q86X95 450 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 STAG3L4Q8TBR4 150 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FRS2Q8WU20 508 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 STYXQ8WUJ0 223 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ASIC4Q96FT7 647 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM193BQ96PV7 902 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 OSBPL10Q9BXB5 764 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ANKRD60Q9BZ19 345 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ELOVL6Q9H5J4 265 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SYTL2Q9HCH5 934 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 KLHL3Q9UH77 587 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 DDX60LQ5H9U9 1706 aaKnown RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 AQP12BA6NM10 295 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 KPNA5O15131 536 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 TSPAN19P0C672 248 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 NPR3P17342 541 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 CLCN5P51795 746 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 SLC16A1P53985 500 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 RPL26P61254 145 aaKnown RBP7.44□□□□□ -1.22
CDHR3-201ENST00000317716 TRAP1Q12931 704 aaKnown RBP7.44□□□□□ -1.22
CDHR3-201ENST00000317716 SNAP47Q5SQN1 464 aa7.44□□□□□ -1.22
CDHR3-201ENST00000317716 TPRG1LQ5T0D9 272 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms