RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 SCAMP5Q8TAC9 235 aa13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF599Q96NL3 588 aa13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 ERVK-6Q9BXR3 956 aa13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 KCNE2Q9Y6J6 123 aa13.37□□□□□ -0.27
SPOCK2-201ENST00000317376 TULP3O75386 442 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 LRATO95237 230 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CSNK2BP67870 215 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 GPR107Q5VW38 600 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 UBE2R2Q712K3 238 aaPredicted RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 HDDC2Q7Z4H3 204 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CCNB1IP1Q9NPC3 277 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 SMPD3Q9NY59 655 aaPredicted RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ESR1P03372 595 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 IFNGR2P38484 337 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 SPAM1P38567 509 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 STX4Q12846 297 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TIMM50Q3ZCQ8 353 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 REXO5Q96IC2 774 aaKnown RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ANGPT4Q9Y264 503 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 MFHAS1Q9Y4C4 1052 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3DA0A087WVF3 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3IA0A087WXS9 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3EA0A087X179 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3KA0A087X1G2 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3FA6NER0 549 aaPredicted RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3LB9A6J9 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3HP0C7X1 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CHRNA4P43681 627 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CDC42P60953 191 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 GRB14Q14449 540 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3GQ6DHY5 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3CQ6IPX1 549 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TBC1D3Q8IZP1 549 aaPredicted RBP13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 PLEKHG4BQ96PX9 1271 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 PROZP22891 400 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 PTGER3P43115 390 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 OR7D4Q8NG98 312 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 CFAP97Q9P2B7 532 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 ATXN10Q9UBB4 475 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 LRRC42Q9Y546 428 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 LAMB1P07942 1786 aa13.36□□□□□ -0.27
SPOCK2-201ENST00000317376 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 NELFEP18615 380 aaKnown RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 COPZ1P61923 177 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 BIKQ13323 160 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 CRTC3Q6UUV7 619 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 R3HCC1LQ7Z5L2 792 aaKnown RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 DEPDC4Q8N2C3 294 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 TOP1MTQ969P6 601 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 OR52B2Q96RD2 323 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF395Q9H8N7 513 aaPredicted RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 OR6A2O95222 327 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 MAGEA10P43363 369 aaPredicted RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 AP1S1P61966 158 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 MPPE1Q53F39 396 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 CIR1Q86X95 450 aaPredicted RBP13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 RAD9AQ99638 391 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 IPPKQ9H8X2 491 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 HCRTO43612 131 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 F2P00734 622 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 TSPAN19P0C672 248 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 PTPN2P17706 415 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ATP12AP54707 1039 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 RGS21Q2M5E4 152 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 CYS1Q717R9 158 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 A8MT66 165 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 UGT2B11O75310 529 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ELFN1P0C7U0 828 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 SULT2A1Q06520 285 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 TOMM20Q15388 145 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 IL23RQ5VWK5 629 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 ERICH5Q6P6B1 374 aa13.35□□□□□ -0.27
SPOCK2-201ENST00000317376 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms