RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BRWD1Q9NSI6 2320 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 CFAP54Q96N23 3096 aa7.52□□□□□ -1.2
TRIM55-202ENST00000315962 CASQ2O14958 399 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 TRMUO75648 421 aaKnown RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 TNFAIP8O95379 198 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PTPN2P17706 415 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PSMC3P17980 439 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 ME2P23368 584 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 GDF5P43026 501 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PPP3CCP48454 512 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 SH3BP2P78314 561 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PLOD1Q02809 727 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 C16orf72Q14CZ0 275 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 TECRLQ5HYJ1 363 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 KRT80Q6KB66 452 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 LPCAT2Q7L5N7 544 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PIWIL4Q7Z3Z4 852 aaKnown RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 C12orf40Q86WS4 652 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 FAM47BQ8NA70 645 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 DCAF4L2Q8NA75 395 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 NUDT8Q8WV74 236 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 DRC3Q9H069 523 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 MRM3Q9HC36 420 aaKnown RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 KIAA1522Q9P206 1035 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CDC14AQ9UNH5 594 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 ITM2BQ9Y287 266 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 SLC30A1Q9Y6M5 507 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PLXNA3P51805 1871 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 RGSL1A5PLK6 1076 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 MATN2O00339 956 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 AXIN1O15169 862 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 EFCAB14O75071 495 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PGLSO95336 258 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PAPSS2O95340 614 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 THRAP10827 490 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PPARGP37231 505 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CSRP3P50461 194 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CLCN5P51795 746 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 SLC7A9P82251 487 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CHRNA6Q15825 494 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 AGKQ53H12 422 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CTSL3PQ5NE16 218 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 LRRC66Q68CR7 880 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 UGT3A1Q6NUS8 523 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 IFNEQ86WN2 208 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CLVS1Q8IUQ0 354 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF786Q8N393 782 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 GPR26Q8NDV2 337 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 TSPAN14Q8NG11 270 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 LPGAT1Q92604 370 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 IRF7Q92985 503 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 RSPRY1Q96DX4 576 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 C3orf30Q96M34 536 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PPP1R2P1Q96PQ5 205 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 STOML2Q9UJZ1 356 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 RNF112Q9ULX5 631 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 FAF1Q9UNN5 650 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-202ENST00000315962 CDYLQ9Y232 598 aa7.52□□□□□ -1.21
TRIM55-202ENST00000315962 PRORSD1PA6NEY8 169 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 HDAC3O15379 428 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 AKAP10O43572 662 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 KATNA1O75449 491 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ATXN8OSP0DMR3 200 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CD1DP15813 335 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 BPIP17213 487 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 NR4A1P22736 598 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 LHCGRP22888 699 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CTBSQ01459 385 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 KLHL35Q6PF15 583 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 MBOAT1Q6ZNC8 495 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 KIAA0408Q6ZU52 694 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 OR2AP1Q8NGE2 309 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FIBINQ8TAL6 211 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 LKAAEAR1Q8TD35 194 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SREK1Q8WXA9 508 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SMG7Q92540 1137 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 LINGO1Q96FE5 620 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 RANBP9Q96S59 729 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ACOX2Q99424 681 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 NAA50Q9GZZ1 169 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 TAS2R13Q9NYV9 303 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 IL17CQ9P0M4 197 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SORCS3Q9UPU3 1222 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CEPT1Q9Y6K0 416 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 DMDP11532 3685 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 NOTCH4Q99466 2003 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 A0A087X1B8 175 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SOCS2O14508 198 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CLASP2O75122 1294 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF189O75820 626 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 LINC00032P0C843 101 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 MTHFD2P13995 350 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FDXRP22570 491 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ATP5F1P24539 256 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms