RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GOLGA8TH3BQL2 631 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 GLUD1P00367 558 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ITGAMP11215 1152 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ADORA2BP29275 332 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 IDUAP35475 653 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PBX2P40425 430 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 STT3AP46977 705 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 DIO3P55073 304 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 DUSP6Q16828 381 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 C1orf146Q5VVC0 180 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SUSD1Q6UWL2 747 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 LINC00523Q86TU6 105 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 NLRP8Q86W28 1048 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 LGI2Q8N0V4 545 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ARHGAP18Q8N392 663 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PPFIBP2Q8ND30 876 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 CHDHQ8NE62 594 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 DYDC1Q8WWB3 177 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF669Q96BR6 464 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 TIMP4Q99727 224 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 NTMT1Q9BV86 223 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SPC25Q9HBM1 224 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SPAG4Q9NPE6 437 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 CD320Q9NPF0 282 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SUN2Q9UH99 717 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 NDRG4Q9ULP0 352 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 STAP1Q9ULZ2 295 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 TRAF6Q9Y4K3 522 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PABPN1LA6NDY0 278 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 AP3B1O00203 1094 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 FGBP02675 491 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 RYKP34925 604 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 NR1H2P55055 460 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SESN2P58004 480 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 RAB39AQ14964 217 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MPEG1Q2M385 716 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF691Q5VV52 312 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SLC8B1Q6J4K2 584 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MAMSTRQ6ZN01 415 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 VN1R5Q7Z5H4 357 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SETD3Q86TU7 594 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PIP4K2CQ8TBX8 421 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 DYNC2LI1Q8TCX1 351 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 FAR1Q8WVX9 515 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SNX19Q92543 992 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 FAM131CQ96AQ9 280 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 SOSTQ9BQB4 213 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF717Q9BY31 904 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 IL21Q9HBE4 155 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 C8orf4Q9NR00 106 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 INTS7Q9NVH2 962 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 QPCTLQ9NXS2 382 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 KLK14Q9P0G3 267 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ADAMTS9Q9P2N4 1935 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ARHGEF37A1IGU5 675 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 HGSO14964 777 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 MSI1O43347 362 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 NRP2O60462 931 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SEC22BO75396 215 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 GABARAPO95166 117 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 TNFAIP8O95379 198 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 LTA4HP09960 611 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 MBL2P11226 248 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 HNRNPLP14866 589 aaKnown RBP eCLIP7.72□□□□□ -1.171e-5■■■□□ 17.9
CNOT4-201ENST00000315544 IDO1P14902 403 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SLC35A2P78381 396 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 KRT81Q14533 505 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 RUNDC3AQ59EK9 446 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 NCEH1Q6PIU2 408 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 C16orf89Q6UX73 402 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 B3GNT6Q6ZMB0 384 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 GOT1L1Q8NHS2 421 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CHFRQ96EP1 664 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 WDR34Q96EX3 536 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 TNIP3Q96KP6 325 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CDX2Q99626 313 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 LBHD1Q9BQE6 289 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 COPS7BQ9H9Q2 264 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 RDH14Q9HBH5 336 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 TMEM39AQ9NV64 488 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 AAR2Q9Y312 384 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 MRPL42Q9Y6G3 142 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 UGT2B11O75310 529 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 NEBLO76041 1014 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PGM3O95394 542 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PYGLP06737 847 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 FRKP42685 505 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CSNK1DP48730 415 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PKNOX1P55347 436 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 OR4D2P58180 307 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 GABARAPL2P60520 117 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ILF2Q12905 390 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SLC39A12Q504Y0 691 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CLEC6AQ6EIG7 209 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PATL1Q86TB9 770 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 REXO5Q96IC2 774 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 UROC1Q96N76 676 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CATSPER2Q96P56 530 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 MCCC1Q96RQ3 725 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms