RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CFLARO15519 480 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 GUCA1CO95843 209 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 TIMP2P16035 220 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 NRIP1P48552 1158 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 MESP2Q0VG99 397 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 PCBP2Q15366 365 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC43-201ENST00000315286 FAM78AQ5JUQ0 283 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 HSD11B1LQ7Z5J1 315 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 PGAM4Q8N0Y7 254 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 OR9I1Q8NGQ6 314 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 DLG3Q92796 817 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 TUBGCP3Q96CW5 907 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 FAM126AQ9BYI3 521 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-201ENST00000315286 WDR41Q9HAD4 459 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 PCDH12Q9NPG4 1184 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 LATS2Q9NRM7 1088 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 IL36AQ9UHA7 158 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 POLG2Q9UHN1 485 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 MBD1Q9UIS9 605 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-201ENST00000315286 SLC8A2Q9UPR5 921 aa18.1■□□□□ 0.49
CCDC43-201ENST00000315286 RAD51BO15315 384 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 HOXC11O43248 304 aaPredicted RBP18.09■□□□□ 0.49
CCDC43-201ENST00000315286 TULP3O75386 442 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 VIPR1P32241 457 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 DPP6P42658 865 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 ATP4BP51164 291 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 CCNIQ14094 377 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 PHKG1Q16816 387 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 PAOXQ6QHF9 649 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 GPRIN3Q6ZVF9 776 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 DCBLD1Q8N8Z6 715 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 OR52B6Q8NGF0 335 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 NRG4Q8WWG1 115 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 SCAMP4Q969E2 229 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 SAMD11Q96NU1 681 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 MRPL1Q9BYD6 325 aaKnown RBP18.09■□□□□ 0.49
CCDC43-201ENST00000315286 NSUN3Q9H649 340 aaKnown RBP18.09■□□□□ 0.49
CCDC43-201ENST00000315286 PKD2L2Q9NZM6 624 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 YBX2Q9Y2T7 364 aaKnown RBP18.09■□□□□ 0.49
CCDC43-201ENST00000315286 OARD1Q9Y530 152 aa18.09■□□□□ 0.49
CCDC43-201ENST00000315286 IGLV3-16A0A075B6K0 115 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 FBP2O00757 339 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 OR4F21O95013 312 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 ADH1CP00326 375 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 S100BP04271 92 aaPredicted RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 SRPRAP08240 638 aaKnown RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 UROSP10746 265 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 CYP2A6P11509 494 aaPredicted RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 GPX3P22352 226 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 GCKP35557 465 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 STX5Q13190 355 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 MAPRE2Q15555 327 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 POM121L1PQ3SYA9 428 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 BNC2Q6ZN30 1099 aaPredicted RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 NPAS3Q8IXF0 933 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 PDPRQ8NCN5 879 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 ULK4Q96C45 1275 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 CDK15Q96Q40 435 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 ZNF382Q96SR6 550 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 ACOX2Q99424 681 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 APOL5Q9BWW9 433 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 SPATA16Q9BXB7 569 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 EBF3Q9H4W6 596 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 NOL11Q9H8H0 719 aaKnown RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 ELOVL2Q9NXB9 296 aa18.08■□□□□ 0.49
CCDC43-201ENST00000315286 TNPO3Q9Y5L0 923 aaKnown RBP18.08■□□□□ 0.49
CCDC43-201ENST00000315286 TSPAN11A1L157 253 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 UPK3BL1B0FP48 263 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 UPK3BL2E5RIL1 263 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 GIPC1O14908 333 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 TAPBPO15533 448 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 SNRPB2P08579 225 aaKnown RBP18.08■□□□□ 0.48
CCDC43-201ENST00000315286 ZNF30P17039 623 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 CCR7P32248 378 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 ERVPABLB-1P60509 514 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 DUSP6Q16828 381 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 SCIMPQ6UWF3 145 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 Q6ZVL8 140 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 FUNDC1Q8IVP5 155 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 NUSAP1Q9BXS6 441 aaKnown RBP18.08■□□□□ 0.48
CCDC43-201ENST00000315286 NDE1Q9NXR1 346 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 KCTD5Q9NXV2 234 aa18.08■□□□□ 0.48
CCDC43-201ENST00000315286 PTBP2Q9UKA9 531 aaKnown RBP18.08■□□□□ 0.48
CCDC43-201ENST00000315286 OTOL1A6NHN0 477 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-201ENST00000315286 ASLP04424 464 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 HGFP14210 728 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 ANPEPP15144 967 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 LBPP18428 481 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 PBX2P40425 430 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 SLC6A11P48066 632 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 ACADVLP49748 655 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 VASPP50552 380 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-201ENST00000315286 PKNOX1P55347 436 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 STX1BP61266 288 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 SHHQ15465 462 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 KIF19Q2TAC6 998 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 TTLL9Q3SXZ7 439 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 ZNF805Q5CZA5 627 aa18.07■□□□□ 0.48
CCDC43-201ENST00000315286 PIGGQ5H8A4 983 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms