RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HGFP14210 728 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 TYRP14679 529 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 LHCGRP22888 699 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 PIK3CGP48736 1102 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 YBX1P67809 324 aaKnown RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 MRPS22P82650 360 aaKnown RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 MBOAT1Q6ZNC8 495 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 RBM44Q6ZP01 1051 aaKnown RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 FRA10AC1Q70Z53 315 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 NKAPQ8N5F7 415 aaKnown RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 C12orf76Q8N812 135 aaPredicted RBP12.27□□□□□ -0.45
RNF4-201ENST00000314289 KCNJ9Q92806 393 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 P2RY12Q9H244 342 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 TDP1Q9NUW8 608 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 ZDHHC7Q9NXF8 308 aa12.27□□□□□ -0.45
RNF4-201ENST00000314289 NR5A2O00482 541 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PFDN6O15212 129 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 GRM6O15303 877 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 HTRA2O43464 458 aaPredicted RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 EFCAB14O75071 495 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 BAIAP3O94812 1187 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 OR4F21O95013 312 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 HOXB8P17481 243 aaPredicted RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 ATP6V0D1P61421 351 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 LCP2Q13094 533 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 MYLK3Q32MK0 819 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 C22orf39Q6P5X5 142 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 CPXM2Q8N436 756 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 CLP1Q92989 425 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 TRMOQ9BU70 441 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 APPL1Q9UKG1 709 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PCDHGB4Q9UN71 923 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 DTNAQ9Y4J8 743 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PCDHGB5Q9Y5G0 923 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 E7ENX8 843 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 H7C0S8 307 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 ESR1P03372 595 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 LBX1P52954 281 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 CDKN3Q16667 212 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 VPS26BQ4G0F5 336 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 C16orf89Q6UX73 402 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 CHSY3Q70JA7 882 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 ADGRG6Q86SQ4 1221 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 FAR2Q96K12 515 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 MRPL1Q9BYD6 325 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 GRIP2Q9C0E4 1043 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PRKAG2Q9UGJ0 569 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 POLG2Q9UHN1 485 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PCTPQ9UKL6 214 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 ASLP04424 464 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 BMPR1AP36894 532 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 SNRPD1P62314 119 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 CAMK1Q14012 370 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 FLOT2Q14254 428 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 TLR1Q15399 786 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 PHKG1Q16816 387 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 TMEM240Q5SV17 173 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 REP15Q6BDI9 236 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 FUNDC1Q8IVP5 155 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 CNBD2Q96M20 576 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 NOL11Q9H8H0 719 aaKnown RBP12.26□□□□□ -0.45
RNF4-201ENST00000314289 ZMYM5Q9UJ78 669 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
RNF4-201ENST00000314289 SYCE1LA8MT33 242 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 DNAJA2O60884 412 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ZNF7P17097 686 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 ITGALP20701 1170 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 HSPA7P48741 367 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 CREMQ03060 361 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 PTSQ03393 145 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 FPGSQ05932 587 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 MESP2Q0VG99 397 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 GALNT1Q10472 559 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 PTK2BQ14289 1009 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ZNF423Q2M1K9 1284 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ATP13A5Q4VNC0 1218 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 KANK2Q63ZY3 851 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 FAM109BQ6ICB4 259 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 UGT2A3Q6UWM9 527 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 BHLHE22Q8NFJ8 381 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 PIP4K2CQ8TBX8 421 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 SKA2Q8WVK7 121 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 DLG3Q92796 817 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 SCAMP4Q969E2 229 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ZFYVE19Q96K21 471 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 SUV39H2Q9H5I1 410 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ZDHHC4Q9NPG8 344 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 LATS2Q9NRM7 1088 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 TTC34A8MYJ7 566 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms