RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LIN7AO14910 233 aaPredicted RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 YY2O15391 372 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 POP7O75817 140 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 PRSS56P0CW18 603 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 ERVK-10P10266 1014 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 IDSP22304 550 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 CA5AP35218 305 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC1A2P43004 574 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 SEMA3AQ14563 771 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 AGAP9Q5VTM2 703 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 PTRHD1Q6GMV3 140 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 WDR93Q6P2C0 686 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 TRMT10CQ7L0Y3 403 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 DET1Q7L5Y6 550 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 C11orf96Q7Z7L8 435 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 ALYREFQ86V81 257 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 GATAD2AQ86YP4 633 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 ARL10Q8N8L6 244 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 FAM46DQ8NEK8 389 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 RHBDD1Q8TEB9 315 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 SETD7Q8WTS6 366 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 C9orf72Q96LT7 481 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 RTKNQ9BST9 563 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 P2RY12Q9H244 342 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 KLC4Q9NSK0 619 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 UCKL1Q9NWZ5 548 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 TAAR2Q9P1P5 351 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 TXNDC16Q9P2K2 825 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 PCOLCE2Q9UKZ9 415 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 TCRBV9S1A1TA0A576 114 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 UBA6A0AVT1 1052 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 SGTAO43765 313 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 S1PR4O95977 384 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 C1orf61Q13536 156 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 TEDDM1Q5T9Z0 273 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 OGFOD3Q6PK18 319 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC30A9Q6PML9 568 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 PIP4P1Q86T03 277 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 CLDN19Q8N6F1 224 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 DPEP2Q9H4A9 486 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 PLAC1Q9HBJ0 212 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 LRRC4CQ9HCJ2 640 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 KLHL42Q9P2K6 505 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 FTSJ1Q9UET6 329 aa17.6■□□□□ 0.41
SSSCA1-201ENST00000309328 CABIN1Q9Y6J0 2220 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 MYLKQ15746 1914 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 KIR2DS5A0A0G2JLQ3 304 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 A0A0G2JNG1 304 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 PRR19A6NJB7 356 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 KIR2DS3K7RE56 304 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 FFAR2O15552 330 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 ZW10O43264 779 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 OR1I1O60431 355 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 CDK4P11802 303 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 F3P13726 295 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 SSTR1P30872 391 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 HALP42357 657 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 CD151P48509 253 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 EIF3BP55884 814 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 KIR2DS5Q14953 304 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 TMED2Q15363 201 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 DEFB133Q30KQ1 61 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 METRNLQ641Q3 311 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 NRROSQ86YC3 692 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 DENND6AQ8IWF6 608 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 EID2Q8N6I1 236 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 ZDHHC1Q8WTX9 485 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 ASZ1Q8WWH4 475 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 KCNJ9Q92806 393 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 NAT6Q93015 286 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 FUT8Q9BYC5 575 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 OSGEPL1Q9H4B0 414 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 STN1Q9H668 368 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 ANKZF1Q9H8Y5 726 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 IL1RAPL1Q9NZN1 696 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 KCNK6Q9Y257 313 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 PRKAB1Q9Y478 270 aa17.59■□□□□ 0.41
SSSCA1-201ENST00000309328 E5RI56 91 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 LDOC1O95751 146 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 PKMP14618 531 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 CD9P21926 228 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 AK4P27144 223 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 CTBP1Q13363 440 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 ILKQ13418 452 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 NR0B2Q15466 257 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 UGT3A1Q6NUS8 523 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 ABRAXAS1Q6UWZ7 409 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 GLRX5Q86SX6 157 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 LDB1Q86U70 411 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 RBM12BQ8IXT5 1001 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 BAHD1Q8TBE0 780 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 BIRC8Q96P09 236 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 CYTH2Q99418 400 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 CPNE1Q99829 537 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 SPATS2LQ9NUQ6 558 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.4
SSSCA1-201ENST00000309328 PCYT1BQ9Y5K3 369 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms