RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MTHFD2P13995 350 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 SLC2A4P14672 509 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 CRY1Q16526 586 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 PARP14Q460N5 1801 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 SPATS1Q496A3 300 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 KDELC1Q6UW63 502 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 ANKRD13BQ86YJ7 626 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 NDNFQ8TB73 568 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 LPPQ93052 612 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 GPR21Q99679 349 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 TFB2MQ9H5Q4 396 aaKnown RBP11.02□□□□□ -0.64
PTPN7-201ENST00000309017 VTA1Q9NP79 307 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 DNAJB9Q9UBS3 223 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 CDH9Q9ULB4 789 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 LOC100130705A0A1B0GUX0 176 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 SLC1A7O00341 560 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 BCKDKO14874 412 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 LSM1O15116 133 aaKnown RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 GPR32O75388 356 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 THP07101 528 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 MMP3P08254 477 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 FDXRP22570 491 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 MAP2K4P45985 399 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TRPC1P48995 793 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 FPGSQ05932 587 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 C6orf136Q5SQH8 315 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 UGT3A1Q6NUS8 523 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 GCNT7Q6ZNI0 430 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 P2RY8Q86VZ1 359 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ADHFE1Q8IWW8 467 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 FAM86B1Q8N7N1 296 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 BPIFB1Q8TDL5 484 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TSPEARQ8WU66 669 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 NDEL1Q9GZM8 345 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 NTN4Q9HB63 628 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 AASSQ9UDR5 926 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ZMYM5Q9UJ78 669 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 GABRDO14764 452 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 KERAO60938 352 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 PRKD3O94806 890 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 MLYCDO95822 493 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 G6PDP11413 515 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 PABPC1P11940 636 aaKnown RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 GGT5P36269 586 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ST13P50502 369 aaKnown RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 MTA1Q13330 715 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 LAPTM4AQ15012 233 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TRIP4Q15650 581 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 KCNJ8Q15842 424 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 PTPRNQ16849 979 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 BRMS1LQ5PSV4 323 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TMEM86AQ8N2M4 240 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 POC5Q8NA72 575 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 FRS2Q8WU20 508 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ATOH8Q96SQ7 321 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ATP13A3Q9H7F0 1226 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 POLR3BQ9NW08 1133 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 TRMT6Q9UJA5 497 aaKnown RBP11.02□□□□□ -0.65
PTPN7-201ENST00000309017 ANGPTL3Q9Y5C1 460 aa11.02□□□□□ -0.65
PTPN7-201ENST00000309017 CAPN15O75808 1086 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 UGT2B4P06133 528 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 HAPLN1P10915 354 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 SLC13A2Q13183 592 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 GTF2IRD2BQ6EKJ0 949 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 GTF2IRD2Q86UP8 949 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 GPSM1Q86YR5 675 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 PAPD5Q8NDF8 572 aaKnown RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 STARD8Q92502 1023 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 C6orf62Q9GZU0 229 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 INVSQ9Y283 1065 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 PSME4Q14997 1843 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 H0Y858 1186 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 PTGESO14684 152 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 DFNA5O60443 496 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 S100BP04271 92 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 IL12AP29459 219 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 AKT1P31749 480 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 NKX2-5P52952 324 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 NCS1P62166 190 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 RPL38P63173 70 aaKnown RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 CTU2Q2VPK5 515 aaKnown RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF540Q8NDQ6 660 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF599Q96NL3 588 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ZFP14Q9HCL3 533 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ABCC13Q9NSE7 274 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ZIM2Q9NZV7 527 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 HS3ST4Q9Y661 456 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 SLC22A1O15245 554 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 RPP40O75818 363 aaKnown RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 PAPSS2O95340 614 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF682O95780 498 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 CAPN1P07384 714 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 SMPD1P17405 629 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 HOXB8P17481 243 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-201ENST00000309017 GSSP48637 474 aa11.01□□□□□ -0.65
PTPN7-201ENST00000309017 PIK3CGP48736 1102 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms