RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 HTRA4P83105 476 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 ZNF460Q14592 562 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 POLD3Q15054 466 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 FAM83EQ2M2I3 478 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 TBCELQ5QJ74 424 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 EGFLAMQ63HQ2 1017 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 SIGIRRQ6IA17 410 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 LCN8Q6JVE9 175 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 NANOGP8Q6NSW7 305 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 EPHX4Q8IUS5 362 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 SLC22A9Q8IVM8 553 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 DENND6AQ8IWF6 608 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 TBC1D15Q8TC07 691 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 COG8Q96MW5 612 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 TBL1YQ9BQ87 522 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 HCFC1R1Q9NWW0 138 aa10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 RABL2AQ9UBK7 228 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-201ENST00000308521 DHRS12A0PJE2 317 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 SAC3D1A6NKF1 404 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 A8MT66 165 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 F5H5T6 163 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 GIPC1O14908 333 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CCL16O15467 120 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 RFPL2O75678 378 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 RASAL1O95294 804 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 RBP1P09455 135 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CHRNB1P11230 501 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 FASP25445 335 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 IRS1P35568 1242 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 PPM1AP35813 382 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 AGAP7PQ5VUJ5 663 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 GAREM2Q75VX8 874 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 VASH1Q7L8A9 365 aaPredicted RBP10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 TCEAL8Q8IYN2 117 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 MINDY1Q8N5J2 469 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 PPHLN1Q8NEY8 458 aaKnown RBP10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 OR7D4Q8NG98 312 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CENPNQ96H22 339 aaPredicted RBP10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 MYRFLQ96LU7 910 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 SPON2Q9BUD6 331 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 MROQ9BYG7 248 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CEP44Q9C0F1 390 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 TMEM248Q9NWD8 314 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 AGO1Q9UL18 857 aaKnown RBP10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 CDC14AQ9UNH5 594 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 NDUFAF1Q9Y375 327 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 TRAF6Q9Y4K3 522 aa10.21□□□□□ -0.77
APOBEC3F-201ENST00000308521 IGLV3-10A0A075B6K4 115 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 A0A1W2PRU2 124 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 CFAP99D6REC4 459 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 SNAP91O60641 907 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 RAMP2O60895 175 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 C8AP07357 584 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 GNAO1P09471 354 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 FCGR1AP12314 374 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 GPX3P22352 226 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 ARNTP27540 789 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 CHRNA4P43681 627 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 SLC12A2P55011 1212 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 SMAD3P84022 425 aaKnown RBP10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 EIF2B5Q13144 721 aaKnown RBP10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 CTBP1Q13363 440 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 OXA1LQ15070 435 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 PPP1R3AQ16821 1122 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 TRIM16LQ309B1 348 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 TMTC4Q5T4D3 741 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 ZNF697Q5TEC3 545 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 AGAP9Q5VTM2 703 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 SLX4IPQ5VYV7 408 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 ABRAXAS1Q6UWZ7 409 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 KIAA0408Q6ZU52 694 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 FUNDC1Q8IVP5 155 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 ELMOD1Q8N336 334 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 PNPT1Q8TCS8 783 aaKnown RBP10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 POF1BQ8WVV4 589 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 RAD9AQ99638 391 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 MUC13Q9H3R2 512 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 SP110Q9HB58 689 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 TNFRSF12AQ9NP84 129 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 COMMD8Q9NX08 183 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 ACTR3BQ9P1U1 418 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 TCAF1Q9Y4C2 921 aa10.21□□□□□ -0.78
APOBEC3F-201ENST00000308521 DRGXA6NNA5 263 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 PER2O15055 1255 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 PEX11BO96011 259 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 F11P03951 625 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 GPIP06744 558 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 MYCLP1P12525 358 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 PAMP19021 973 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 PSMA4P25789 261 aaKnown RBP10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 SLC1A2P43004 574 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 STX1BP61266 288 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 NRG1Q02297 640 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 RING1Q06587 406 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 PMS2P3Q13401 168 aa10.2□□□□□ -0.78
APOBEC3F-201ENST00000308521 IHHQ14623 411 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms