RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 THOC1Q96FV9 657 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 SEC16BQ96JE7 1060 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 VPS35Q96QK1 796 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 ATOH8Q96SQ7 321 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 DERL2Q9GZP9 239 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 NSRP1Q9H0G5 558 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 SYTL2Q9HCH5 934 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 CD93Q9NPY3 652 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 MID2Q9UJV3 735 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 NDRG2Q9UN36 371 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 DUSP12Q9UNI6 340 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 ZFR2Q9UPR6 939 aaKnown RBP6.87□□□□□ -1.31
PTCD2-201ENST00000308077 TRPM6Q9BX84 2022 aa6.87□□□□□ -1.31
PTCD2-201ENST00000308077 NPEPPSL1A6NEC2 478 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 IGLON5A6NGN9 336 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 A8MT66 165 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CDC7O00311 574 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 INPP4BO15327 924 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TRIM13O60858 407 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 RBP1P09455 135 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ATP1B2P14415 290 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 AKT1P31749 480 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SKIV2L2P42285 1042 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 KPNA2P52292 529 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 DPTQ07507 201 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 STX3Q13277 289 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 FGL2Q14314 439 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 FBXO43Q4G163 708 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 LIPMQ5VYY2 423 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ATG16L1Q676U5 607 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SEL1L3Q68CR1 1132 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 KLC3Q6P597 504 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 Q6ZS52 159 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 NKAPQ8N5F7 415 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PLA2G15Q8NCC3 412 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 GLYATL1Q969I3 302 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 KIAA1191Q96A73 305 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 LINGO1Q96FE5 620 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 MSANTD3Q96H12 275 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SORT1Q99523 831 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 GATA5Q9BWX5 397 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 FBRSQ9HAH7 460 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 FBXL12Q9NXK8 326 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TSR3Q9UJK0 312 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CA14Q9ULX7 337 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 MYO9AB2RTY4 2548 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 NUMA1Q14980 2115 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TSPAN6O43657 245 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PLRG1O43660 514 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PCDH8O95206 1070 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 DNTTP04053 509 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 C7P10643 843 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 MTHFD2P13995 350 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 NDUFV2P19404 249 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ATP5F1P24539 256 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CCR7P32248 378 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SLC1A6P48664 564 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CTSCP53634 463 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 IL2P60568 153 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SHC2P98077 582 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TSNQ15631 228 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 RSPO4Q2I0M5 234 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PUS10Q3MIT2 529 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ACSBG2Q5FVE4 666 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 GKAP1Q5VSY0 366 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 RAET1GQ6H3X3 334 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 UGT3A1Q6NUS8 523 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PIWIL4Q7Z3Z4 852 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 SPATA21Q7Z572 469 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TRIM74Q86UV6 250 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ZBTB2Q8N680 514 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 BEND7Q8N7W2 519 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 RASGEF1AQ8N9B8 481 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 PPP1R14CQ8TAE6 165 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 RHEBL1Q8TAI7 183 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 INPP5DQ92835 1189 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 MRGPRX1Q96LB2 322 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 TFB2MQ9H5Q4 396 aaKnown RBP6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CYP4F12Q9HCS2 524 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 THAP1Q9NVV9 213 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 ZMIZ1Q9ULJ6 1067 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 MMP17Q9ULZ9 603 aa6.86□□□□□ -1.31
PTCD2-201ENST00000308077 CNOT1A5YKK6 2376 aaKnown RBP6.85□□□□□ -1.31
PTCD2-201ENST00000308077 TCRBV21S2A2A0A5A6 115 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 OR2AG2A6NM03 316 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 UBXN8O00124 270 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 BTN3A1O00481 513 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 KERAO60938 352 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 TM7SF2O76062 418 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 OR56A5P0C7T3 313 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 CHRNB1P11230 501 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 MSH3P20585 1137 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 GRK2P25098 689 aa6.85□□□□□ -1.31
PTCD2-201ENST00000308077 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
PTCD2-201ENST00000308077 AOAHP28039 575 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms