RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CES5AQ6NT32 575 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 CYB5D1Q6P9G0 228 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 TXNDC11Q6PKC3 985 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SBSNQ6UWP8 590 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ACAD11Q709F0 780 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 RPS27LQ71UM5 84 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 TECPR1Q7Z6L1 1165 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ADAMTSL2Q86TH1 951 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SFTPA1Q8IWL2 248 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 YAF2Q8IY57 180 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 RAVER1Q8IY67 606 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 TRAM1L1Q8N609 369 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ZBTB2Q8N680 514 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 UTP4Q969X6 686 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 RAB3IPQ96QF0 476 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 PANX3Q96QZ0 392 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 TBC1D10AQ9BXI6 508 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 FAM83DQ9H4H8 585 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ZNF385DQ9H6B1 395 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 WDR55Q9H6Y2 383 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 NUDT4Q9NZJ9 180 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SARDHQ9UL12 918 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 PPM1HQ9ULR3 514 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 WDFY4Q6ZS81 3184 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 H0Y858 1186 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 SPINT1O43278 529 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 MAGEC1O60732 1142 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 CDK14O94921 469 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 TRIM16O95361 564 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 ENO1P06733 434 aaKnown RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 FGF4P08620 206 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 LAMP2P13473 410 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 HLA-EP13747 358 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 ITGB6P18564 788 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 DGKAP23743 735 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 EEF1DP29692 281 aaKnown RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 PDCD2Q16342 344 aaPredicted RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 LSM12Q3MHD2 195 aaKnown RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 FBXW10Q5XX13 1052 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 ERAP2Q6P179 960 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 Q6ZVL8 140 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 GPSM1Q86YR5 675 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 UCMAQ8WVF2 138 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 MIPEPQ99797 713 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 KXD1Q9BQD3 176 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 BTBD10Q9BSF8 475 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 MEAF6Q9HAF1 191 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 KCTD5Q9NXV2 234 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 THAP10Q9P2Z0 257 aaPredicted RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 CD84Q9UIB8 345 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 RIF1Q5UIP0 2472 aaKnown RBP11.71□□□□□ -0.53
TRIM40-205ENST00000307859 CFAP54Q96N23 3096 aa11.71□□□□□ -0.53
TRIM40-205ENST00000307859 GOLGA8QA0A0J9YX86 632 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 GOLGA8OA6NCC3 632 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 LRRC14BA6NHZ5 514 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 E9PBE3 544 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 GOLGA8NF8WBI6 632 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 EIF3FO00303 357 aaPredicted RBP11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ARNTLO00327 626 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.54
TRIM40-205ENST00000307859 NEMP1O14524 444 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 MGRN1O60291 552 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 KLHL41O60662 606 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 CBSLP0DN79 551 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 GM2AP17900 193 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 EPHA3P29320 983 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 PRDX6P30041 224 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 CBSP35520 551 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ETV3P41162 512 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 CDH13P55290 713 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 SH3BP2P78314 561 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 CLCQ05315 142 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 BTKQ06187 659 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 LCP2Q13094 533 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 GBX1Q14549 363 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 TGFBIQ15582 683 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 PPP1R3AQ16821 1122 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 TTLL9Q3SXZ7 439 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ANKS6Q68DC2 871 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 PARM1Q6UWI2 310 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 SERPINA13PQ6UXR4 307 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 RINLQ6ZS11 566 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 MYO1HQ8N1T3 1032 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 DDHD1Q8NEL9 900 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ZNF483Q8TF39 744 aaPredicted RBP11.71□□□□□ -0.54
TRIM40-205ENST00000307859 NAT14Q8WUY8 206 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 FGF14Q92915 247 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 SCAMP4Q969E2 229 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ARRDC3Q96B67 414 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 RIPOR3Q96MK2 946 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 NSUN5Q96P11 429 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms