RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 STX16O14662 325 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 UBDO15205 165 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CLOCKO15516 846 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SCO2O43819 266 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ADAMTS4O75173 837 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 VPS4BO75351 444 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 F11P03951 625 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 RBP1P09455 135 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ODC1P11926 461 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 BMP1P13497 986 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CPB1P15086 417 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ACPPP15309 386 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 HOXB6P17509 224 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 EPORP19235 508 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CR2P20023 1033 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ADORA2BP29275 332 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 MAPKAPK2P49137 400 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CLCNKBP51801 687 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 KPNA1P52294 538 aaPredicted RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 PCDH1Q08174 1060 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 IL10RBQ08334 325 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SMARCB1Q12824 385 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 FADDQ13158 208 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SF3B4Q15427 424 aaKnown RBP eCLIP5.39□□□□□ -1.552e-7■■□□□ 14.3
VPS50-202ENST00000305866 SKIV2LQ15477 1246 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 TIGD5Q53EQ6 642 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 AGKQ53H12 422 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 Q5BKY6 102 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 PRSS36Q5K4E3 855 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ABRAXAS1Q6UWZ7 409 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 HS3ST5Q8IZT8 346 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 CARNMT1Q8N4J0 409 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 C2orf15Q8WU43 125 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 CYGBQ8WWM9 190 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 FCRL1Q96LA6 429 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 TMEM74Q96NL1 305 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 APOL2Q9BQE5 337 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 DCUN1D5Q9BTE7 237 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ZBED2Q9BTP6 218 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 NUSAP1Q9BXS6 441 aaKnown RBP5.39□□□□□ -1.55
VPS50-202ENST00000305866 SLC39A8Q9C0K1 460 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 GOLGA2P5Q9HBQ8 144 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 TMLHEQ9NVH6 421 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 POU2F3Q9UKI9 436 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 PCTPQ9UKL6 214 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 ACOT9Q9Y305 439 aa5.39□□□□□ -1.55
VPS50-202ENST00000305866 SAC3D1A6NKF1 404 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 H3BNC9 293 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 RECKO95980 971 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 GOT2P00505 430 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 UMPSP11172 480 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 NCK1P16333 377 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ZNF37AP17032 561 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 CHMP24386 653 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ALDH7A1P49419 539 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 CD47Q08722 323 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 STX5Q13190 355 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 IKZF1Q13422 519 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 HIST2H2ACQ16777 129 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 BSPRYQ5W0U4 402 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 B3GNT8Q7Z7M8 397 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SYVN1Q86TM6 617 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FAM124AQ86V42 546 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 CYP4Z1Q86W10 505 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 LYSMD2Q8IV50 215 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FAM217AQ8IXS0 508 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TRPV1Q8NER1 839 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 RAB2BQ8WUD1 216 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 C11orf24Q96F05 449 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 CCDC97Q96F63 343 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 AURKBQ96GD4 344 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 RDH12Q96NR8 316 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PPP1R16BQ96T49 567 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PITX2Q99697 317 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 FAM83CQ9BQN1 747 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 TPK1Q9H3S4 243 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 WDCPQ9H6R7 721 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 ELAC1Q9H777 363 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 RGS18Q9NS28 235 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 OPTCQ9UBM4 332 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 COMMD10Q9Y6G5 202 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 MEIS3P2A8K0S8 358 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 GAPDHSO14556 408 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 OR7A17O14581 309 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 LSM1O15116 133 aaKnown RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 GCM2O75603 506 aaPredicted RBP5.38□□□□□ -1.55
VPS50-202ENST00000305866 DNAJB5O75953 348 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 EOMESO95936 686 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 THP07101 528 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 SLC2A3P11169 496 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 CDH1P12830 882 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 IL7RP16871 459 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PFKLP17858 780 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 AKAP5P24588 427 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 PIGFQ07326 219 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 C6orf141Q5SZD1 244 aa5.38□□□□□ -1.55
VPS50-202ENST00000305866 HECTD2Q5U5R9 776 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms