RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PSMG2Q969U7 264 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DPEP2Q9H4A9 486 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 EXD2Q9NVH0 621 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MFHAS1Q9Y4C4 1052 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TCF4P15884 667 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MNDAP41218 407 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHRNA4P43681 627 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HSF2Q03933 536 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TAC4Q86UU9 113 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GPR135Q8IZ08 494 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HTATIP2Q9BUP3 242 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TBC1D17Q9HA65 648 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GTF2IRD1Q9UHL9 959 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FKBPLQ9UIM3 349 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC31A1O15431 190 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UROSP10746 265 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AKR1D1P51857 326 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LRRC52Q8N7C0 313 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FAM13CQ8NE31 585 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NECTIN3Q9NQS3 549 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CCDC162PA2VCL2 907 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TOR1BO14657 336 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 KCNA5P22460 613 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 KIR3DL1P43629 444 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MAPK12P53778 367 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TUSC3Q13454 348 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMCO1Q147U7 214 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GALNT13Q8IUC8 556 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SNX33Q8WV41 574 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FATE1Q969F0 183 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GPR25O00155 361 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LRCH4O75427 683 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CLDN11O75508 207 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CDKN2BP42772 138 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DNASE1L1P49184 302 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PARP15Q460N3 678 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C7orf61Q8IZ16 206 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FEM1AQ9BSK4 669 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ELOVL7A1L3X0 281 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR6C75A6NL08 312 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IFNA6P05013 189 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PBX3P40426 434 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MASP1P48740 699 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MTPNP58546 118 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ENPEPQ07075 957 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CPNE9Q8IYJ1 553 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C1orf127Q8N9H9 656 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 S100ZQ8WXG8 99 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMG7Q92540 1137 aaKnown RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LHX5Q9H2C1 402 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PREX1Q8TCU6 1659 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR51F1A6NGY5 319 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PRMT5O14744 637 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MSCO60682 206 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NOL4O94818 638 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IDH3AP50213 366 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMARCB1Q12824 385 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NANOGNBQ7Z5D8 188 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PRDM8Q9NQV8 689 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ACRP10323 421 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AHCYP23526 432 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PLA2G16P53816 162 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC8B1Q6J4K2 584 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TMEM220Q6QAJ8 160 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RASSF6Q6ZTQ3 369 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CPNE8Q86YQ8 564 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C4orf32Q8N8J7 132 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DQX1Q8TE96 717 aaKnown RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GORASP1Q9BQQ3 440 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TMEM27Q9HBJ8 222 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TCAF1Q9Y4C2 921 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 H7C0S8 307 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GNRH1P01148 92 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ASGR1P07306 291 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CTSOP43234 321 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FOXM1Q08050 763 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TBC1D21Q8IYX1 336 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHIAQ9BZP6 476 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR51V1Q9H2C8 321 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ING3Q9NXR8 418 aa13.43□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DEC1Q9P2X7 70 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms