RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 C18orf21Q32NC0 220 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 SGO1Q5FBB7 561 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 PIWIL3Q7Z3Z3 882 aaKnown RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 PIANPQ8IYJ0 282 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 SCML4Q8N228 414 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 CHPT1Q8WUD6 406 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 EEF1AKMT1Q8WVE0 214 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 HOPXQ9BPY8 73 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 GPR62Q9BZJ7 368 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ALG2Q9H553 416 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 INTS7Q9NVH2 962 aaKnown RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 EVLQ9UI08 416 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 TRMT6Q9UJA5 497 aaKnown RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ITGB1BP2Q9UKP3 347 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ZFP37Q9Y6Q3 630 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 GSK3BP49841 420 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 TRIP4Q15650 581 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 USP41Q3LFD5 358 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 SYVN1Q86TM6 617 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ADI1Q9BV57 179 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 DUS2Q9NX74 493 aaKnown RBP13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 NDST3O95803 873 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 ENDOUP21128 410 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 JAK1P23458 1154 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 RPS3AP61247 264 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 GALNT1Q10472 559 aaPredicted RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 AAK1Q2M2I8 961 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CLLU1OSQ5K130 101 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CST9Q5W186 159 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 NADSYN1Q6IA69 706 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 ANKRD26P1Q6NSI1 321 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 PSAPL1Q6NUJ1 521 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 PARP8Q8N3A8 854 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 OR52B6Q8NGF0 335 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 DICER1Q9UPY3 1922 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 NYNRINQ9P2P1 1898 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 C2orf81A6NN90 581 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 WASH4PA8MWX3 477 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 INHBBP09529 407 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 MC4RP32245 332 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CRHR2Q13324 411 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 BFSP2Q13515 415 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SLC14A2Q15849 920 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 PARP15Q460N3 678 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 FRA10AC1Q70Z53 315 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CARM1Q86X55 608 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 GPSM1Q86YR5 675 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 METTL6Q8TCB7 284 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 UROC1Q96N76 676 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 MUC3BQ9H195 1237 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SMPD4Q9NXE4 827 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SARDHQ9UL12 918 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 MIA3Q5JRA6 1907 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 FXYD1O00168 92 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 PRAMEF11O60813 436 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SLC22A3O75751 556 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 IDUAP35475 653 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 DGKQP52824 942 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 TXNL4AP83876 142 aaKnown RBP13.29□□□□□ -0.28
CTDP1-202ENST00000299543 IFITM2Q01629 132 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 MERTKQ12866 999 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 NHSL2Q5HYW2 709 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 C17orf99Q6UX52 265 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 MDGA1Q8NFP4 955 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
CTDP1-202ENST00000299543 VPS26AO75436 327 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 MYO1DO94832 1006 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 MTPNP58546 118 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 DSC3Q14574 896 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 PPP4R4Q6NUP7 873 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 KIAA1191Q96A73 305 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 TFB2MQ9H5Q4 396 aaKnown RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 BBIP1A8MTZ0 92 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 PFDN6O15212 129 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 B4GAT1O43505 415 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 KERAO60938 352 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF12P17014 697 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms