RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 GOLGA4Q13439 2230 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DYTNA2CJ06 578 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 EFCAB9A8MZ26 197 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CDC7O00311 574 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 FFAR3O14843 346 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GPR42O15529 346 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 JUNBP17275 347 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 IGFBP5P24593 272 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 HTR1EP28566 365 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 AIF1P55008 147 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CYP4F2P78329 520 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GALNT1Q10472 559 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GALNT3Q14435 633 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GTF2IRD2BQ6EKJ0 949 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 USP51Q70EK9 711 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GTF2IRD2Q86UP8 949 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CNDP2Q96KP4 475 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 UBXN10Q96LJ8 280 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 MAGEE1Q9HCI5 957 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TRIM39Q9HCM9 518 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TAS2R13Q9NYV9 303 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 NOX1Q9Y5S8 564 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GPR45Q9Y5Y3 372 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 A8MV72 311 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DFNA5O60443 496 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 MATN4O95460 622 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GOT2P00505 430 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 HMBSP08397 361 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CD1DP15813 335 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 HCAR3P49019 387 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 RENBPP51606 427 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 RPL38P63173 70 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GPRIN3Q6ZVF9 776 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SIX5Q8N196 739 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SETD9Q8NE22 299 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 OR13C4Q8NGS5 318 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 HASPINQ8TF76 798 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 LGALS12Q96DT0 336 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DEPDC7Q96QD5 511 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SLC2A13Q96QE2 648 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DCSTAMPQ9H295 470 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GIMAP4Q9NUV9 329 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TMEM98Q9Y2Y6 226 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 ARL5AQ9Y689 179 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 TCRBV5S2A0A599 114 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 ILVBLA1L0T0 632 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 RFPL2O75678 378 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 DIRAS1O95057 198 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 GUCA1CO95843 209 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 S1PR4O95977 384 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 G6PDP11413 515 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 ITGB6P18564 788 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.6
TRUB1-201ENST00000298746 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.6
TRUB1-201ENST00000298746 PHC1P78364 1004 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 RAPSNQ13702 412 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 RCAN2Q14206 197 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 ZNF235Q14590 738 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 TRIM60Q495X7 471 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 TMEM209Q96SK2 561 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 EGFL8Q99944 293 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 MCMBPQ9BTE3 642 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 NFKBIZQ9BYH8 718 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 DSN1Q9H410 356 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 AIG1Q9NVV5 245 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 PAK1IP1Q9NWT1 392 aaPredicted RBP11.27□□□□□ -0.6
TRUB1-201ENST00000298746 UTS2RQ9UKP6 389 aa11.27□□□□□ -0.6
TRUB1-201ENST00000298746 LTBP1Q14766 1721 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 FAM234BA2RU67 622 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 RGS10O43665 173 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 PRSS56P0CW18 603 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 PAX3P23760 479 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 ERVK-8P63133 956 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 AP5B1Q2VPB7 878 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 RANBP10Q6VN20 620 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 HORMAD1Q86X24 394 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 FAR1Q8WVX9 515 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 MUL1Q969V5 352 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms