RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PANX3Q96QZ0 392 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 C1QTNF3Q9BXJ4 246 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 KLHL42Q9P2K6 505 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 IKZF3Q9UKT9 509 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 HCN2Q9UL51 889 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 PRPF19Q9UMS4 504 aaKnown RBP9.03□□□□□ -0.96
PDPN-201ENST00000294489 TICRRQ7Z2Z1 1910 aa9.03□□□□□ -0.96
PDPN-201ENST00000294489 LRRC14BA6NHZ5 514 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UPK3BL1B0FP48 263 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UPK3BL2E5RIL1 263 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 RPS17P08708 135 aaKnown RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 CYP2A6P11509 494 aaPredicted RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 LAMP2P13473 410 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 GNAZP19086 355 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UGT1A6P19224 532 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UGT1A1P22309 533 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UGT1A4P22310 534 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UGT1A3P35503 534 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 UGT1A5P35504 534 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 CCNG1P51959 295 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 STX1BP61266 288 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 RUNX3Q13761 415 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 HNRNPA1L2Q32P51 320 aaKnown RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 PGM2L1Q6PCE3 622 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 FBXW8Q8N3Y1 598 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 TWIST2Q8WVJ9 160 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 SEMA4BQ9NPR2 832 aaPredicted RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 PFDN4Q9NQP4 134 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 STX18Q9P2W9 335 aaKnown RBP9.02□□□□□ -0.96
PDPN-201ENST00000294489 DEC1Q9P2X7 70 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 B4GALT6Q9UBX8 382 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 DNAJC15Q9Y5T4 150 aa9.02□□□□□ -0.96
PDPN-201ENST00000294489 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 PSMD12O00232 456 aaPredicted RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 TBX10O75333 385 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TRIM16O95361 564 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 CHEK2O96017 543 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 S100BP04271 92 aaPredicted RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 DGKAP23743 735 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 NFKBIAP25963 317 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 AP2B1P63010 937 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 SLC34A1Q06495 639 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 STX5Q13190 355 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TGFBIQ15582 683 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 CRY1Q16526 586 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 UGT3A2Q3SY77 523 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 ARSIQ5FYB1 569 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 ATAT1Q5SQI0 421 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 KANK2Q63ZY3 851 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 EFL1Q7Z2Z2 1120 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 DDIASQ8IXT1 998 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDPN-201ENST00000294489 DSELQ8IZU8 1212 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 MYO1HQ8N1T3 1032 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 NXPE1Q8N323 547 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TERB1Q8NA31 727 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 OR56A4Q8NGH8 313 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 ULK4Q96C45 1275 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 ANKRD27Q96NW4 1050 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 BOCQ9BWV1 1114 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 MRPL1Q9BYD6 325 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 NUDT4Q9NZJ9 180 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 EPS15L1Q9UBC2 864 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TMPRSS11EQ9UL52 423 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 PPP6CO00743 305 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 SPINT1O43278 529 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 FKBP6O75344 327 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 SLC25A14O95258 325 aaPredicted RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 PSMC3P17980 439 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 LTBRP36941 435 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 NSG1P42857 185 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 ARHGEF7Q14155 803 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 FASTKQ14296 549 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 PPP1R3AQ16821 1122 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TTLL9Q3SXZ7 439 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 LARP4Q71RC2 724 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDPN-201ENST00000294489 TECPR1Q7Z6L1 1165 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 CLDN19Q8N6F1 224 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 KCNV2Q8TDN2 545 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 JADE3Q92613 823 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 RCN3Q96D15 328 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 HGH1Q9BTY7 390 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 ANGPTL2Q9UKU9 493 aa9.02□□□□□ -0.97
PDPN-201ENST00000294489 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
PDPN-201ENST00000294489 ATP6AP2A0A1C7CYW4 349 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 CCDC85CA6NKD9 419 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 ANHXE9PGG2 379 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 PSMD11O00231 422 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 VPS4BO75351 444 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 ATP6AP2O75787 350 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 PDE5AO76074 875 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 ITGB6P18564 788 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 ITGB7P26010 798 aa9.01□□□□□ -0.97
PDPN-201ENST00000294489 GJA4P35212 333 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms