RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 NSMCE2Q96MF7 247 aa16.64■□□□□ 0.25
CHRNE-201ENST00000293780 PSKH2Q96QS6 385 aa16.64■□□□□ 0.25
CHRNE-201ENST00000293780 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
CHRNE-201ENST00000293780 ACTL8Q9H568 366 aa16.64■□□□□ 0.25
CHRNE-201ENST00000293780 PLGRKTQ9HBL7 147 aa16.64■□□□□ 0.25
CHRNE-201ENST00000293780 IFT80Q9P2H3 777 aaPredicted RBP16.64■□□□□ 0.25
CHRNE-201ENST00000293780 UBA2Q9UBT2 640 aaPredicted RBP16.64■□□□□ 0.25
CHRNE-201ENST00000293780 KANSL1LA0AUZ9 987 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TYW5A2RUC4 315 aaKnown RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 ZNF701M0R085 212 aaPredicted RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TSPAN3O60637 253 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 KATNA1O75449 491 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 VNN2O95498 520 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 CAPN1P07384 714 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 DCKP27707 260 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TGFBIQ15582 683 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 IL27RAQ6UWB1 636 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 ZBTB46Q86UZ6 589 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 PROSER1Q86XN7 944 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 SPC25Q9HBM1 224 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 SCUBE2Q9NQ36 999 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TDRKHQ9Y2W6 561 aaKnown RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 PCDHGA11Q9Y5H2 935 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 MOXD2PA6NHM9 499 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 UPK1AO00322 258 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TFPTP0C1Z6 253 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 SHMT2P34897 504 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 MAGEA11P43364 429 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 PRKG2Q13237 762 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 EFL1Q7Z2Z2 1120 aaKnown RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 ZNF554Q86TJ5 538 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 METTL6Q8TCB7 284 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 SOCS4Q8WXH5 440 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TRIB2Q92519 343 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 BDH2Q9BUT1 245 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 TDRD1Q9BXT4 1180 aaKnown RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 CARS2Q9HA77 564 aaKnown RBP16.63■□□□□ 0.25
CHRNE-201ENST00000293780 LTB4R2Q9NPC1 389 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 C8orf4Q9NR00 106 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 RIC8BQ9NVN3 520 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 PKD2L2Q9NZM6 624 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 CDH7Q9ULB5 785 aa16.63■□□□□ 0.25
CHRNE-201ENST00000293780 INPPL1O15357 1258 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
CHRNE-201ENST00000293780 CR2P20023 1033 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 LPOP22079 712 aaPredicted RBP16.62■□□□□ 0.25
CHRNE-201ENST00000293780 SGSHP51688 502 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 FXNQ16595 210 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 XKR5Q6UX68 686 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 RNF19BQ6ZMZ0 732 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 OSCP1Q8WVF1 389 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 LINC01599Q8WXQ3 324 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 THAP11Q96EK4 314 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 DOK1Q99704 481 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
CHRNE-201ENST00000293780 RAI2Q9Y5P3 530 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 CHD5Q8TDI0 1954 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 COQ9O75208 318 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 ALBP02768 609 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 MATN1P21941 496 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 OXCT1P55809 520 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 RING1Q06587 406 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 CCNYL2Q5T2Q4 361 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 TAS2R42Q7RTR8 314 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 FAM86B1Q8N7N1 296 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 SGCDQ92629 289 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 GFM2Q969S9 779 aaKnown RBP16.62■□□□□ 0.25
CHRNE-201ENST00000293780 TMBIM1Q969X1 311 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 ZNF382Q96SR6 550 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 MAGEH1Q9H213 219 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 POLR3HQ9Y535 204 aaPredicted RBP16.62■□□□□ 0.25
CHRNE-201ENST00000293780 PCDHB3Q9Y5E6 796 aa16.62■□□□□ 0.25
CHRNE-201ENST00000293780 MTMR11A4FU01 709 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 E5RI56 91 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 H3BNC9 293 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 CDH1P12830 882 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 EEF1B2P24534 225 aaKnown RBP16.61■□□□□ 0.25
CHRNE-201ENST00000293780 NFKBIAP25963 317 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 HLCSP50747 726 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 IST1P53990 364 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 ARSFP54793 590 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 DUSP4Q13115 394 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 TRIM71Q2Q1W2 868 aaKnown RBP16.61■□□□□ 0.25
CHRNE-201ENST00000293780 RFTN2Q52LD8 501 aaPredicted RBP16.61■□□□□ 0.25
CHRNE-201ENST00000293780 CYP20A1Q6UW02 462 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 DPP10Q8N608 796 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 PPP1R14BQ96C90 147 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 CGREF1Q99674 301 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 HTTP42858 3142 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 SH3PXD2BA1X283 911 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 ACSL4O60488 711 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 F11P03951 625 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 SFSWAPQ12872 951 aaKnown RBP16.61■□□□□ 0.25
CHRNE-201ENST00000293780 BNIP3Q12983 259 aa16.61■□□□□ 0.25
CHRNE-201ENST00000293780 ABRAXAS2Q15018 415 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms