RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TAS2R1Q9NYW7 299 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 IFT80Q9P2H3 777 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 M0QZQ0 153 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZBTB11O95625 1053 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 GTF2E2P29084 291 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 STARP49675 285 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 RHAGQ02094 409 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 ELP6Q0PNE2 266 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 IL18R1Q13478 541 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 TNFAIP8L3Q5GJ75 292 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 GLYATQ6IB77 296 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 RAB2BQ8WUD1 216 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 LGMNQ99538 433 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 HAPLN2Q9GZV7 340 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 FETUBQ9UGM5 382 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 TPD52L2O43399 206 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 CYP2A6P11509 494 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPR17Q13304 367 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 CTBP1Q13363 440 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZBTB6Q15916 424 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCNYL2Q5T2Q4 361 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM131AQ6UXB0 335 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 C16orf62Q7Z3J2 963 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 CBR4Q8N4T8 237 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPR88Q9GZN0 384 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 OSGEPL1Q9H4B0 414 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 PCDH18Q9HCL0 1135 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 ADGRE2Q9UHX3 823 aa11.73□□□□□ -0.53
SYNGAP1-201ENST00000293748 C4BPAP04003 597 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 GOT1P17174 413 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 TSPAN8P19075 237 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MAPK8P45983 427 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 AIF1P55008 147 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ARPC4P59998 168 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPIBQ01892 262 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CNPY1Q3B7I2 92 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 RTP2Q5QGT7 225 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR52K2Q8NGK3 314 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CPT1BQ92523 772 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PPP1R14AQ96A00 147 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 LENG8Q96PV6 779 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 TTYH3Q9C0H2 523 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 LINC00032P0C843 101 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SERPINA4P29622 427 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ACTR3P61158 418 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 P2RY8Q86VZ1 359 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 TMEM174Q8WUU8 243 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 P2RY11Q96G91 374 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 B3GALT6Q96L58 329 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 RACGAP1Q9H0H5 632 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PEX16Q9Y5Y5 336 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ANKDD1BA6NHY2 528 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 FFAR3O14843 346 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 BCKDKO14874 412 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPR42O15529 346 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 OAZ2O95190 189 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ANGPTL1O95841 491 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CXCR2P25025 360 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MATKP42679 507 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 NUMBP49757 651 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 AFF1P51825 1210 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 HADHBP55084 474 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SCN1BQ07699 218 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ANXA8L1Q5VT79 327 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ERICH5Q6P6B1 374 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 R3HCC1LQ7Z5L2 792 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZC3H7AQ8IWR0 971 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 VWCEQ96DN2 955 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 NODALQ96S42 347 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CIPCQ9C0C6 399 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CACNG4Q9UBN1 327 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR10H3O60404 316 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PLIN3O60664 434 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 NOL4O94818 638 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 IPO13O94829 963 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CYP11A1P05108 521 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 HOXD13P35453 343 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PSEN1P49768 467 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 CDH13P55290 713 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SMAD4Q13485 552 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 HKDC1Q2TB90 917 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SCIMPQ6UWF3 145 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM92BQ6ZTR7 304 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PTCHD4Q6ZW05 846 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPPL2CQ8IUH8 684 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MINDY2Q8NBR6 621 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms