RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MRNIPQ6NTE8 343 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 IYDQ6PHW0 289 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 ABRAXAS1Q6UWZ7 409 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 ARL14Q8N4G2 192 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 BEND7Q8N7W2 519 aaPredicted RBP26.44■■□□□ 1.82
SSU72-201ENST00000291386 SEC14L1Q92503 715 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 DNAJC16Q9Y2G8 782 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 TEX264Q9Y6I9 313 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 ASXL3Q9C0F0 2248 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 CPED1A4D0V7 1026 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 ADRB1P08588 477 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 OGNP20774 298 aaKnown RBP26.43■■□□□ 1.82
SSU72-201ENST00000291386 LONRF1Q17RB8 773 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 TYSND1Q2T9J0 566 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 EFL1Q7Z2Z2 1120 aaKnown RBP26.43■■□□□ 1.82
SSU72-201ENST00000291386 LMNTD2Q8IXW0 634 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 CLDN19Q8N6F1 224 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 PNPLA1Q8N8W4 532 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 ART4Q93070 314 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 PWWP2AQ96N64 755 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 TCF12Q99081 682 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 OSGEPL1Q9H4B0 414 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 VPS37BQ9H9H4 285 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 PRDM8Q9NQV8 689 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 PRSS21Q9Y6M0 314 aa26.43■■□□□ 1.82
SSU72-201ENST00000291386 KIR2DS5A0A0G2JLQ3 304 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 A0A0G2JNG1 304 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 BHMG1C9JSJ3 638 aaPredicted RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 KIR2DS3K7RE56 304 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 ZNF500O60304 480 aaPredicted RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 BANF1O75531 89 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 FASLGP48023 281 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 KIR2DS5Q14953 304 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 ZNF658BQ4V348 819 aaPredicted RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 GLE1Q53GS7 698 aaKnown RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 SPANXN3Q5MJ09 141 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 PERM1Q5SV97 790 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 METRNLQ641Q3 311 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 NEPROQ6NW34 567 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 ZNF438Q7Z4V0 828 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 RAB44Q7Z6P3 723 aaPredicted RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 SDCCAG8Q86SQ7 713 aaPredicted RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 IGDCC3Q8IVU1 814 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.42■■□□□ 1.82
SSU72-201ENST00000291386 NOA1Q8NC60 698 aaKnown RBP26.42■■□□□ 1.82
SSU72-201ENST00000291386 NAT14Q8WUY8 206 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 PATE1Q8WXA2 126 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 CCM2Q9BSQ5 444 aa26.42■■□□□ 1.82
SSU72-201ENST00000291386 F8W8V4 182 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 OR1I1O60431 355 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 SNX2O60749 519 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 ELK3P41970 407 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 MAZP56270 477 aaKnown RBP26.41■■□□□ 1.82
SSU72-201ENST00000291386 NFE2L1Q14494 772 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 CRYMQ14894 314 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 NR1D2Q14995 579 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 RNF187Q5TA31 235 aaPredicted RBP26.41■■□□□ 1.82
SSU72-201ENST00000291386 XKR5Q6UX68 686 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 FAM83HQ6ZRV2 1179 aaPredicted RBP26.41■■□□□ 1.82
SSU72-201ENST00000291386 LDB1Q86U70 411 aaPredicted RBP26.41■■□□□ 1.82
SSU72-201ENST00000291386 AVL9Q8NBF6 648 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 HM13Q8TCT9 377 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 MAPK15Q8TD08 544 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 WDR83Q9BRX9 315 aaKnown RBP26.41■■□□□ 1.82
SSU72-201ENST00000291386 PHACTR1Q9C0D0 580 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 LRIT1Q9P2V4 623 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 ACSL5Q9ULC5 683 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 RNF215Q9Y6U7 377 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 RP1P56715 2156 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 SPTBN2O15020 2390 aa26.41■■□□□ 1.82
SSU72-201ENST00000291386 PRMT5O14744 637 aaPredicted RBP26.4■■□□□ 1.82
SSU72-201ENST00000291386 PFDN6O15212 129 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 EIF3HO15372 352 aaKnown RBP eCLIP26.4■■□□□ 1.82
SSU72-201ENST00000291386 OR56A5P0C7T3 313 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 BRAFP15056 766 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 RPS3P23396 243 aaKnown RBP eCLIP26.4■■□□□ 1.824e-7■■■■□ 21.2
SSU72-201ENST00000291386 PMLP29590 882 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 LRRC6Q86X45 466 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 CILP2Q8IUL8 1156 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 SLC37A2Q8TED4 501 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 CCDC74AQ96AQ1 378 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 P2RY12Q9H244 342 aa26.4■■□□□ 1.82
SSU72-201ENST00000291386 SARS2Q9NP81 518 aaKnown RBP26.4■■□□□ 1.82
SSU72-201ENST00000291386 SCHIP1Q9P0W5 487 aaPredicted RBP26.4■■□□□ 1.82
SSU72-201ENST00000291386 GOLGA8KD6RF30 607 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 GOLGA8TH3BQL2 631 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 NDUFS3O75489 264 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 FTH1P02794 183 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 XRCC1P18887 633 aaPredicted RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 ADARP55265 1226 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 SLC7A5Q01650 507 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 PDIA2Q13087 525 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 THOC5Q13769 683 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 FRG1Q14331 258 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 SMAD1Q15797 465 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 STEAP4Q687X5 459 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 DHRS13Q6UX07 377 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 ZDHHC24Q6UX98 284 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 CENPUQ71F23 418 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms