RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 AKR1A1P14550 325 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 IDSP22304 550 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 MIPP30301 263 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 GLP1RP43220 463 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 PGDP52209 483 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 HELQQ8TDG4 1101 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 IL12RB2Q99665 862 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 IGSF1Q8N6C5 1336 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 CTTNBP2Q8WZ74 1663 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 GNSP15586 552 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ACSL1P33121 698 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 TROAPQ12815 778 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ZNF676Q8N7Q3 588 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 FBXO15Q8NCQ5 510 aaPredicted RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 MIPEPQ99797 713 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 PEX16Q9Y5Y5 336 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 PZPP20742 1482 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 THEGLP0DJG4 465 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 GNB3P16520 340 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 AZGP1P25311 298 aaKnown RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ROR2Q01974 943 aaKnown RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 PSRC1Q6PGN9 363 aaPredicted RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
SMARCA5-201ENST00000283131 CLPTM1LQ96KA5 538 aa13.08□□□□□ -0.31
SMARCA5-201ENST00000283131 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 PCCBP05166 539 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 KIR3DL1P43629 444 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 PTDSS1P48651 473 aaKnown RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 BACE1P56817 501 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 BLMHQ13867 455 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 C2orf73Q8N5S3 287 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ADAM2Q99965 735 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ULBP1Q9BZM6 244 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 C13orf42A0A1B0GVH6 325 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 IFNA4P05014 189 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 SPARCP09486 303 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CRTC2Q53ET0 693 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 HMBOX1Q6NT76 420 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 MREGQ8N565 214 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 HDAC7Q8WUI4 952 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 SENP8Q96LD8 212 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 OR5B12Q96R08 314 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 IL33O95760 270 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 NR2C1P13056 603 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 MC4RP32245 332 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CCR10P46092 362 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 NFIXQ14938 502 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 H3BQF6 201 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ANGPTL1O95841 491 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 VAMP1P23763 118 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 AHSA2Q719I0 299 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 UBE2Q1Q7Z7E8 422 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CFAP206Q8IYR0 622 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TMEM184CQ9NVA4 438 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 C14orf105Q9NVL8 296 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 RAB26Q9ULW5 256 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF175Q9Y473 711 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CDK12Q9NYV4 1490 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 FSBPO95073 299 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 PET100P0DJ07 73 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 SLC6A4P31645 630 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 CTSOP43234 321 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 MLC1Q15049 377 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.326e-12■■■□□ 14.9
SMARCA5-201ENST00000283131 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 MFSD8Q8NHS3 518 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TSPAN18Q96SJ8 248 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 AIREO43918 545 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF14P17017 642 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TIE1P35590 1138 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 MTX3Q5HYI7 312 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms