RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ZNF470Q6ECI4 717 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PTRHD1Q6GMV3 140 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 MRNIPQ6NTE8 343 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 OGFOD3Q6PK18 319 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CERS6Q6ZMG9 384 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 RBM44Q6ZP01 1051 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 CAPN12Q6ZSI9 719 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 SPRED1Q7Z699 444 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 RAB44Q7Z6P3 723 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 SDCCAG8Q86SQ7 713 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 CAND1Q86VP6 1230 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 HOOK3Q86VS8 718 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 ANKMY2Q8IV38 441 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PIANPQ8IYJ0 282 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CFAP206Q8IYR0 622 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
CD44-204ENST00000279452 BBOF1Q8ND07 529 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MNS1Q8NEH6 495 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 GSDMBQ8TAX9 411 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 SKA2Q8WVK7 121 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 ELMO1Q92556 727 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PEX13Q92968 403 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PWWP2AQ96N64 755 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 DEPDC7Q96QD5 511 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 C19orf43Q9BQ61 176 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 KIFC1Q9BW19 673 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 WWP1Q9H0M0 922 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 RAB17Q9H0T7 212 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 LRRN3Q9H3W5 708 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MRM3Q9HC36 420 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 EPB41L5Q9HCM4 733 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 TREX1Q9NSU2 369 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 C20orf96Q9NUD7 363 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 WDR70Q9NW82 654 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MARCH4Q9P2E8 410 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 TSR3Q9UJK0 312 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 RIMKLBQ9ULI2 386 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 ATXN7L1Q9ULK2 861 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 CHMP2BQ9UQN3 213 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CFAP20Q9Y6A4 193 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 LRP4O75096 1905 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SCN8AQ9UQD0 1980 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 TRBV5-4A0A0C4DH59 114 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 FAM237BA0A1B0GVD1 139 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 MAGEB16A2A368 324 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CTAGE15A4D2H0 777 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 MGAT4DA6NG13 374 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 OR5K4A6NMS3 321 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 D6RAR5 112 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 E5RI56 91 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SMAPO00193 183 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 IFRD1O00458 451 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 CASC3O15234 703 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 PPM1DO15297 605 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 NUDT21O43809 227 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 DUX1O43812 170 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 KCNJ13O60928 360 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 AP2A2O94973 939 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SEC31AO94979 1220 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 TUBB4AP04350 444 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 F7P08709 466 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 CTAGE8P0CG41 777 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 AMD1P17707 334 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 MPSTP25325 297 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 RPL21P46778 160 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 PREPP48147 710 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 ACVR1Q04771 509 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 PDIA2Q13087 525 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 CRYMQ14894 314 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 TMED2Q15363 201 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 LONRF1Q17RB8 773 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 ANKRD20A4Q4UJ75 823 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SNAP47Q5SQN1 464 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 RNF187Q5TA31 235 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 NKAIN2Q5VXU1 208 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 KIAA0930Q6ICG6 404 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 HIBCHQ6NVY1 386 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 DUS1LQ6P1R4 473 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 IYDQ6PHW0 289 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 NAPRTQ6XQN6 538 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 FAM83HQ6ZRV2 1179 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 USP53Q70EK8 1073 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 TMPRSS7Q7RTY8 843 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 C11orf96Q7Z7L8 435 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CTAGE6Q86UF2 777 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CCDC25Q86WR0 208 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 TMPRSS12Q86WS5 348 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CTAGE4Q8IX94 777 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 ZBED8Q8IZ13 594 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SFRP1Q8N474 314 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 AVL9Q8NBF6 648 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 OR2L2Q8NH16 312 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 OR10G6Q8NH81 332 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 WDR48Q8TAF3 677 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 GABPB2Q8TAK5 448 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 HM13Q8TCT9 377 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 JPH3Q8WXH2 748 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 TMEM159Q96B96 161 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms