RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SNAP47Q5SQN1 464 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 ZNF574Q6ZN55 896 aaPredicted RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 PPHLN1Q8NEY8 458 aaKnown RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 NCSTNQ92542 709 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 SLC46A1Q96NT5 459 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 CMKLR1Q99788 373 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 C19orf43Q9BQ61 176 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 EIF2B3Q9NR50 452 aaKnown RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 ZDHHC3Q9NYG2 299 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 PYCARDQ9ULZ3 195 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 MAP1BP46821 2468 aaKnown RBP13.36□□□□□ -0.27
CT55-201ENST00000276241 FREM2Q5SZK8 3169 aa13.36□□□□□ -0.27
CT55-201ENST00000276241 AGAP14A8MT82 685 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 ZNF185O15231 689 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 RRP8O43159 456 aaKnown RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 THRAP10827 490 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 ATP1B2P14415 290 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 XRCC1P18887 633 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 SLC19A1P41440 591 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 ABCG1P45844 678 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 PRLHRP49683 370 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 LIMK2P53671 638 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 EPHA4P54764 986 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 CRADDP78560 199 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 CFHR1Q03591 330 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 DMPKQ09013 629 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 DBN1Q16643 649 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 CLPPQ16740 277 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 SKIDA1Q1XH10 827 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 GPR33Q49SQ1 333 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 TSTD2Q5T7W7 516 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 AFTPHQ6ULP2 937 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 ABRAXAS1Q6UWZ7 409 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 C4orf22Q6V702 233 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 PIANPQ8IYJ0 282 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 OR13J1Q8NGT2 312 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 GPR150Q8NGU9 434 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 JPH3Q8WXH2 748 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 IMP3Q9NV31 184 aaKnown RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
CT55-201ENST00000276241 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
CT55-201ENST00000276241 RP1P56715 2156 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 A0A087WV48 116 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 TRBV5-4A0A0C4DH59 114 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 GOLGA6L10A0A0M3HER8 536 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 CCDC162PA2VCL2 907 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 MGAT4DA6NG13 374 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 LILRA5A6NI73 299 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 A8MU76 341 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 SGTAO43765 313 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 KCNJ13O60928 360 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 GOT2P00505 430 aaKnown RBP13.34□□□□□ -0.27
CT55-201ENST00000276241 KRT14P02533 472 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 POLBP06746 335 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 SLC35G4P0C7Q5 338 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 TYRP1P17643 537 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 ADRA1DP25100 572 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 ITPKBP27987 946 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 FOXN2P32314 431 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 ETV5P41161 510 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 PRAMEP78395 509 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 GPS1Q13098 491 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 LAMB3Q13751 1172 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 GPR18Q14330 331 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
CT55-201ENST00000276241 TMEM71Q6P5X7 295 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
CT55-201ENST00000276241 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 TMEM26Q6ZUK4 368 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
CT55-201ENST00000276241 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 OR2L2Q8NH16 312 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 HEXDCQ8WVB3 486 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 KCNE4Q8WWG9 221 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 HDAC10Q969S8 669 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.34□□□□□ -0.27
CT55-201ENST00000276241 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 RANBP9Q96S59 729 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
CT55-201ENST00000276241 USP24Q9UPU5 2620 aa13.34□□□□□ -0.27
CT55-201ENST00000276241 IGF2RP11717 2491 aa13.33□□□□□ -0.27
CT55-201ENST00000276241 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
CT55-201ENST00000276241 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms