RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 EPHB3P54753 998 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 PRSS36Q5K4E3 855 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 EGFLAMQ63HQ2 1017 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 DDIASQ8IXT1 998 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CLYBLQ8N0X4 340 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ELMOD1Q8N336 334 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CALML6Q8TD86 181 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 HDAC2Q92769 488 aaKnown RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 MYLPFQ96A32 169 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 TCEAL4Q96EI5 215 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CGREF1Q99674 301 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 TBL1YQ9BQ87 522 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 LRRC3Q9BY71 257 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CMTM6Q9NX76 183 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ANAPC2Q9UJX6 822 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 OAZ3Q9UMX2 235 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 MIA3Q5JRA6 1907 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ANKRD36A6QL64 1941 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 C16orf96A6NNT2 1141 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 UBXN8O00124 270 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SUPT7LO94864 414 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 LDLRP01130 860 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 NTRK1P04629 796 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SLC6A2P23975 617 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 HTR1EP28566 365 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ADRA1AP35348 466 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 EPHA5P54756 1037 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TPI1P60174 286 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 EPS8Q12929 822 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TOP3AQ13472 1001 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 AGAP7PQ5VUJ5 663 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CCDC80Q76M96 950 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 IGFN1Q86VF2 1251 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PROSER1Q86XN7 944 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TMC8Q8IU68 726 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SPATA2LQ8IUW3 424 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 MIER2Q8N344 545 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PARP8Q8N3A8 854 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 BPIFB1Q8TDL5 484 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ING5Q8WYH8 240 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SNX19Q92543 992 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TMEM125Q96AQ2 219 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 C19orf60Q96EN9 201 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ZNF334Q9HCZ1 680 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SDR39U1Q9NRG7 319 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 MUTYHQ9UIF7 546 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 NAALAD2Q9Y3Q0 740 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PTPRDP23468 1912 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CLDN25C9JDP6 229 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CEBPBP17676 345 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 HDCP19113 662 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 MATN1P21941 496 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CCNCP24863 283 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 HTR7P34969 479 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 AVPR1AP37288 418 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 LEPRP48357 1165 aaKnown RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TMED10P49755 219 aaKnown RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 GEMP55040 296 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PPP1R3AQ16821 1122 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 SDHAF4Q5VUM1 108 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 XAF1Q6GPH4 301 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 DENND5AQ6IQ26 1287 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TMEM53Q6P2H8 277 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 DNAJB7Q7Z6W7 309 aaPredicted RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PHYKPLQ8IUZ5 450 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 GPR152Q8TDT2 470 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CYGBQ8WWM9 190 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 FGF13Q92913 245 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PSMG2Q969U7 264 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 PCED1BQ96HM7 432 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 FUBP3Q96I24 572 aaKnown RBP eCLIP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 FBXL20Q96IG2 436 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 TNIP3Q96KP6 325 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 OMDQ99983 421 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 RAD21L1Q9H4I0 556 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 AKIP1Q9NQ31 210 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 ASAH2Q9NR71 780 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 FBXO5Q9UKT4 447 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 MRPS23Q9Y3D9 190 aaKnown RBP10.22□□□□□ -0.77
UPF3B-201ENST00000276201 CPQQ9Y646 472 aa10.22□□□□□ -0.77
UPF3B-201ENST00000276201 NUP205Q92621 2012 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 H0Y858 1186 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 M0QYT0 321 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 EI24O14681 340 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 AQP9O43315 295 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 MOSPD3O75425 235 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 F9P00740 461 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 ASGR2P07307 311 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 LAMP2P13473 410 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 HNRNPLP14866 589 aaKnown RBP eCLIP10.21□□□□□ -0.774e-7■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms