RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SNX2O60749 519 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 OR4F21O95013 312 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 PYGLP06737 847 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CKBP12277 381 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 LPOP22079 712 aaPredicted RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 OR4D2P58180 307 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CBX2Q14781 532 aaPredicted RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 TBPL2Q6SJ96 375 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 SCIMPQ6UWF3 145 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 PROSER1Q86XN7 944 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 HID1Q8IV36 788 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 ZNF786Q8N393 782 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 KCNJ9Q92806 393 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 ISOC1Q96CN7 298 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 SCLYQ96I15 445 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 SMPD3Q9NY59 655 aaPredicted RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 EBF1Q9UH73 591 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 ZNHIT2Q9UHR6 403 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CCL27Q9Y4X3 112 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 PCDHB3Q9Y5E6 796 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 ZFP37Q9Y6Q3 630 aaPredicted RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 C2orf81A6NN90 581 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CLOCKO15516 846 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 VPS26AO75436 327 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CLTBP09497 229 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CES1P23141 567 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 RPS9P46781 194 aaKnown RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 RGS19P49795 217 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CLCN7P51798 805 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CCL23P55773 120 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 PCBP2Q15366 365 aaKnown RBP eCLIP12.29□□□□□ -0.44
BEST3-201ENST00000266661 CRY1Q16526 586 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 TBC1D25Q3MII6 688 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 FAM171A1Q5VUB5 890 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 LETMD1Q6P1Q0 360 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 GPR141Q7Z602 305 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 ESAMQ96AP7 390 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 B3GALT6Q96L58 329 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CINPQ9BW66 212 aaPredicted RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 LRRC3Q9BY71 257 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 CCDC68Q9H2F9 335 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
BEST3-201ENST00000266661 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
BEST3-201ENST00000266661 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 OR7A17O14581 309 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 SNAP91O60641 907 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 CRCPO75575 148 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 CLIC3O95833 236 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 CHEK2O96017 543 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 LDLRP01130 860 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 ATF6P18850 670 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 DCKP27707 260 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 MC4RP32245 332 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 TTPAP49638 278 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 HTR6P50406 440 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 SCNN1BP51168 640 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 SGSHP51688 502 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 OXCT1P55809 520 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 IL2P60568 153 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 RPS24P62847 133 aaKnown RBP12.28□□□□□ -0.44
BEST3-201ENST00000266661 SELPLGQ14242 412 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 PTPRRQ15256 657 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 TGFBIQ15582 683 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
BEST3-201ENST00000266661 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 SLC2A7Q6PXP3 512 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 DHRSXQ8N5I4 330 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 C12orf43Q96C57 262 aaKnown RBP12.28□□□□□ -0.44
BEST3-201ENST00000266661 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 LINGO1Q96FE5 620 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 C1orf50Q9BV19 199 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 PFDN4Q9NQP4 134 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 NUDT4Q9NZJ9 180 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 TRMT6Q9UJA5 497 aaKnown RBP12.28□□□□□ -0.44
BEST3-201ENST00000266661 AGO1Q9UL18 857 aaKnown RBP12.28□□□□□ -0.44
BEST3-201ENST00000266661 PCDHGA11Q9Y5H2 935 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 RAI2Q9Y5P3 530 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 GMEB1Q9Y692 573 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 COMMD10Q9Y6G5 202 aa12.28□□□□□ -0.44
BEST3-201ENST00000266661 ZFC3H1O60293 1989 aaKnown RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 NCF1BA6NI72 391 aaPredicted RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 NCF1CA8MVU1 366 aaPredicted RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 ANKRD66B4E2M5 251 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 H0YAE9 185 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 FZD6O60353 706 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms