RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SNX19Q92543 992 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 NXPE3Q969Y0 559 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 PTERQ96BW5 349 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 CDK15Q96Q40 435 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 STN1Q9H668 368 aaKnown RBP9.2□□□□□ -0.94
SSR3-201ENST00000265044 IGSF5Q9NSI5 407 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 DHRS7Q9Y394 339 aa9.2□□□□□ -0.94
SSR3-201ENST00000265044 H3BM21 787 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 IFRD1O00458 451 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 HTRA2O43464 458 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 GRIA2P42262 883 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 AGTR2P50052 363 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 GRSF1Q12849 480 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSR3-201ENST00000265044 LCP2Q13094 533 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 STX5Q13190 355 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 FASTKQ14296 549 aaKnown RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 TGFBIQ15582 683 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 OR4D1Q15615 310 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 ACSBG2Q5FVE4 666 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PRSS36Q5K4E3 855 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 IFNEQ86WN2 208 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 VN1R2Q8NFZ6 395 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 SLC26A7Q8TE54 656 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PYCR2Q96C36 320 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 NUS1Q96E22 293 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 IPPKQ9H8X2 491 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 EFCAB1Q9HAE3 211 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 FBXL12Q9NXK8 326 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LIMD1Q9UGP4 676 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 BCAP29Q9UHQ4 241 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PACSIN3Q9UKS6 424 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 MTF2Q9Y483 593 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 NR5A2O00482 541 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 GREM1O60565 184 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 DNAJC8O75937 253 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 WDR47O94967 919 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 OR4F21O95013 312 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 KRT16P08779 473 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 SLC2A4P14672 509 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 ITPKAP23677 461 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 ATP6AP1LQ52LC2 224 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LACTB2Q53H82 288 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 ERN2Q76MJ5 926 aaKnown RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 HSD11B1LQ7Z5J1 315 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 RIN3Q8TB24 985 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 CHFRQ96EP1 664 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 A0A1W2PP55 124 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 NVLO15381 856 aaKnown RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 SNNO75324 88 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 STK16O75716 305 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 TM7SF2O76062 418 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 SERPIND1P05546 499 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LAMP2P13473 410 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LRGUKQ96M69 825 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LRRC3BQ96PB8 259 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 MYADMQ96S97 322 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 FBXL21Q9UKT6 434 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 SORCS3Q9UPU3 1222 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 ASF1AQ9Y294 204 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PRKAB1Q9Y478 270 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 LAMA2P24043 3122 aaKnown RBP9.19□□□□□ -0.94
SSR3-201ENST00000265044 GREB1Q4ZG55 1949 aa9.19□□□□□ -0.94
SSR3-201ENST00000265044 PSMD12O00232 456 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 KRT6AP02538 564 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KRT6BP04259 564 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 HOXB2P14652 356 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 TIMP2P16035 220 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KRT6CP48668 564 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KCNK10P57789 538 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 IRF8Q02556 426 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PTSQ03393 145 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 TMEM115Q12893 351 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 AAK1Q2M2I8 961 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 TYSND1Q2T9J0 566 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 EGFLAMQ63HQ2 1017 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 TMEM215Q68D42 235 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PARS2Q7L3T8 475 aaKnown RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 CLEC14AQ86T13 490 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 SCUBE1Q8IWY4 988 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KCNV2Q8TDN2 545 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 TWIST2Q8WVJ9 160 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C19orf60Q96EN9 201 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C1orf50Q9BV19 199 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 OSBPL6Q9BZF3 934 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 DNAJC28Q9NX36 388 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 LNPEPQ9UIQ6 1025 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 L3MBTL1Q9Y468 752 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 STON1Q9Y6Q2 735 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 ULK1O75385 1050 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PDE5AO76074 875 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 OTCP00480 354 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 LBPP18428 481 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 LHCGRP22888 699 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 HYAL1Q12794 435 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms