RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 LIX1Q8N485 282 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 FAM156AQ8NDB6 213 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 LRTOMTQ8WZ04 291 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 HBEGFQ99075 208 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 C1orf109Q9NX04 203 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ADAM30Q9UKF2 790 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 SIPA1L3O60292 1781 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 MYH10P35580 1976 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CACNB4O00305 520 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 NIPSNAP2O75323 286 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CTSEP14091 401 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 OR7A2PQ8NGA2 310 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 WDR60Q8WVS4 1066 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CLN6Q9NWW5 311 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 DUS2Q9NX74 493 aaKnown RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 MOCS1Q9NZB8 636 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 PNMA8CA0A1B0GUJ8 204 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 URADA6NGE7 173 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 FPGTO14772 594 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ECI2O75521 394 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 NELFEP18615 380 aaKnown RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 SPIBQ01892 262 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 PRKCQQ04759 706 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ADGRE1Q14246 886 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 HIPK1Q86Z02 1210 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 OR8H2Q8N162 312 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 NACC2Q96BF6 587 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 Q96MT0 163 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 VPS35Q96QK1 796 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 MKS1Q9NXB0 559 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 FAM234BA2RU67 622 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ANKRD66B4E2M5 251 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 FFAR2O15552 330 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 EPOP01588 193 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CCNFP41002 786 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 USP46P62068 366 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CARD16Q5EG05 197 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 KIAA1324Q6UXG2 1013 aaKnown RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 COL26A1Q96A83 441 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF607Q96SK3 696 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 SLC27A6Q9Y2P4 619 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 TLE2Q04725 743 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 PHPT1Q9NRX4 125 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 DAPK2Q9UIK4 370 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 SLC9A8Q9Y2E8 581 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 A0A1W2PQ45 241 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 A0A1W2PQY0 241 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 K7EPI3 171 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 SIX3O95343 332 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 ANXA4P09525 319 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 MAGEA10P43363 369 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 ROR2Q01974 943 aaKnown RBP16.52■□□□□ 0.24
PHRF1-201ENST00000264555 CBR4Q8N4T8 237 aa16.52■□□□□ 0.24
PHRF1-201ENST00000264555 ISM1B1AKI9 464 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 H0Y858 1186 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 PNLIPRP1P54315 467 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 MANFP55145 182 aaKnown RBP16.52■□□□□ 0.23
PHRF1-201ENST00000264555 LAPTM5Q13571 262 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 C14orf80Q86SX3 495 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 BTN2A2Q8WVV5 523 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 RTP4Q96DX8 246 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 RBM4BQ9BQ04 359 aaKnown RBP16.52■□□□□ 0.23
PHRF1-201ENST00000264555 RBM4Q9BWF3 364 aaKnown RBP16.52■□□□□ 0.23
PHRF1-201ENST00000264555 SUV39H2Q9H5I1 410 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 ZMYND8Q9ULU4 1186 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-201ENST00000264555 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-201ENST00000264555 TBX10O75333 385 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 DNTTP04053 509 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 RGS1Q08116 209 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 MED27Q6P2C8 311 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 CNKSR3Q6P9H4 555 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 PHC3Q8NDX5 983 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 AKTIPQ9H8T0 292 aa16.52■□□□□ 0.23
PHRF1-201ENST00000264555 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 DGKGP49619 791 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ZNF280BQ86YH2 543 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ZDHHC14Q8IZN3 488 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 RHBGQ9H310 441 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 APODP05090 189 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 GSTM5P46439 218 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 RPS9P46781 194 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ADARP55265 1226 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ATP1A4Q13733 1029 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 CFAP206Q8IYR0 622 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ZNF461Q8TAF7 563 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 SLC13A3Q8WWT9 602 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 MTERF3Q96E29 417 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM209Q96SK2 561 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 UGT2B11O75310 529 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ERAL1O75616 437 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 TSPAN19P0C672 248 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 FGF3P11487 239 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 GPAT3Q53EU6 434 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms