RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 EFCAB7A8K855 629 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 AGAP14A8MT82 685 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 ERVH48-1M5A8F1 160 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 LDB2O43679 373 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 KRT86O43790 486 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 MSH3P20585 1137 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 GDF10P55107 478 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 LONRF2Q1L5Z9 754 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 PCSK4Q6UW60 755 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 RBM12BQ8IXT5 1001 aaKnown RBP15.78■□□□□ 0.12
USE1-201ENST00000263897 BMPERQ8N8U9 685 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 OR13C4Q8NGS5 318 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 PMEPA1Q969W9 287 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 CXorf40BQ96DE9 158 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 SGF29Q96ES7 293 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 WBP1Q96G27 269 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 TMEM121Q9BTD3 319 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 DDA1Q9BW61 102 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 POT1Q9NUX5 634 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 B3GALT1Q9Y5Z6 326 aa15.78■□□□□ 0.12
USE1-201ENST00000263897 PSMD3O43242 534 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 UBXN7O94888 489 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 C9P02748 559 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 TYRP1P17643 537 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 AMD1P17707 334 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 AKT1P31749 480 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.12
USE1-201ENST00000263897 HADHAP40939 763 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 HALP42357 657 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 ZNF140P52738 457 aaPredicted RBP15.77■□□□□ 0.12
USE1-201ENST00000263897 MC2RQ01718 297 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 COL9A2Q14055 689 aaPredicted RBP15.77■□□□□ 0.12
USE1-201ENST00000263897 P3H1Q32P28 736 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 FNBP1LQ5T0N5 605 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 DCAF12Q5T6F0 453 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 METRNLQ641Q3 311 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 FAM83HQ6ZRV2 1179 aaPredicted RBP15.77■□□□□ 0.12
USE1-201ENST00000263897 FAM129CQ86XR2 697 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 LRRC40Q9H9A6 602 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 FBXO8Q9NRD0 319 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 KLHL3Q9UH77 587 aa15.77■□□□□ 0.12
USE1-201ENST00000263897 ZNF106Q9H2Y7 1883 aaKnown RBP15.77■□□□□ 0.11
USE1-201ENST00000263897 MN1Q10571 1320 aaPredicted RBP15.76■□□□□ 0.11
USE1-201ENST00000263897 KLHL33A6NCF5 533 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 MGAT4DA6NG13 374 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 STMND1H3BQB6 276 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 ARHGAP6O43182 974 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 TPH1P17752 444 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 RAB15P59190 212 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 TMPRSS15P98073 1019 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 SRSF6Q13247 344 aaKnown RBP15.76■□□□□ 0.11
USE1-201ENST00000263897 GPR18Q14330 331 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 NFE2L1Q14494 772 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 RPE65Q16518 533 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 TAF1BQ53T94 588 aaPredicted RBP15.76■□□□□ 0.11
USE1-201ENST00000263897 MANEAQ5SRI9 462 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 ANKS6Q68DC2 871 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 DET1Q7L5Y6 550 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 BEND7Q8N7W2 519 aaPredicted RBP15.76■□□□□ 0.11
USE1-201ENST00000263897 ATG4AQ8WYN0 398 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 TTC9Q92623 222 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 NKD1Q969G9 470 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 ULK4Q96C45 1275 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 RTP4Q96DX8 246 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 C9orf72Q96LT7 481 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 TEFMQ96QE5 360 aaKnown RBP15.76■□□□□ 0.11
USE1-201ENST00000263897 SPRY4Q9C004 299 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 CRLS1Q9UJA2 301 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 PSMD13Q9UNM6 376 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 PIEZO2Q9H5I5 2752 aa15.76■□□□□ 0.11
USE1-201ENST00000263897 BAHCC1Q9P281 2608 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 TOX3O15405 576 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 CAPN5O15484 640 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 SGTAO43765 313 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 AP2A1O95782 977 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 PRB1P04280 392 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 ANKRD34CP0C6C1 535 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 ITGALP20701 1170 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 GFERP55789 205 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 GPR33Q49SQ1 333 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 SEL1L2Q5TEA6 688 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 KIAA1614Q5VZ46 1190 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 SNX20Q7Z614 316 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 VASH2Q86V25 355 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 SLC13A5Q86YT5 568 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 NXPE1Q8N323 547 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 TAB3Q8N5C8 712 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 OR2L2Q8NH16 312 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 NAT14Q8WUY8 206 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 HEXDCQ8WVB3 486 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 JPH3Q8WXH2 748 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 DCUN1D1Q96GG9 259 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 LINC00615Q96LM1 132 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 ZPBPQ9BS86 351 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 FRMD8P1Q9BZ68 369 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 FAM96AQ9H5X1 160 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 NLE1Q9NVX2 485 aaPredicted RBP15.75■□□□□ 0.11
USE1-201ENST00000263897 EPHA6Q9UF33 1036 aa15.75■□□□□ 0.11
USE1-201ENST00000263897 ACSL5Q9ULC5 683 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms