RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 AHI1Q8N157 1196 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
TCF3-201ENST00000262965 MYO19Q96H55 970 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 TRIM8Q9BZR9 551 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 SGK2Q9HBY8 427 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 DNAJB4Q9UDY4 337 aa13.43□□□□□ -0.26
TCF3-201ENST00000262965 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TNFRSF11BO00300 401 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 IL1BP01584 269 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 MOGSQ13724 837 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 PTCD2Q8WV60 388 aaKnown RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 DIRAS2Q96HU8 199 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 SLC38A2Q96QD8 506 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 MARCH7Q9H992 704 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 CTPS2Q9NRF8 586 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 IFT80Q9P2H3 777 aaPredicted RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 UGT2B11O75310 529 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 NIPSNAP2O75323 286 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 FYNP06241 537 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 DSG4Q86SJ6 1040 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 PYCR2Q96C36 320 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TMEM74Q96NL1 305 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 GFM1Q96RP9 751 aaKnown RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TMEM138Q9NPI0 162 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 EQTNQ9NQ60 294 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 GALPQ9UBC7 116 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 IQCMA0A1B0GVH7 501 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 CXCR6O00574 342 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 BMP7P18075 431 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 ADAM17P78536 824 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 INTS6LQ5JSJ4 861 aaKnown RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 KIAA0930Q6ICG6 404 aaPredicted RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 COMMD2Q86X83 199 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 CRYBG2Q8N1P7 616 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 CLIP4Q8N3C7 705 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
TCF3-201ENST00000262965 TNKS2Q9H2K2 1166 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 PSME2Q9UL46 239 aa13.42□□□□□ -0.26
TCF3-201ENST00000262965 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 STBD1O95210 358 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 TACR2P21452 398 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 PCLAFQ15004 111 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 RABL3Q5HYI8 236 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 ZC3HC1Q86WB0 502 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 LRRC17Q8N6Y2 441 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 SLC13A3Q8WWT9 602 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 NSMCE3Q96MG7 304 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 MIPEPQ99797 713 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 MCUBQ9NWR8 336 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 ZNF232Q9UNY5 417 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 KLF11O14901 512 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 SLC7A4O43246 635 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 PSMA1P25786 263 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 PDSS2Q86YH6 399 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 RTL3Q8N8U3 475 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 SKA1Q96BD8 255 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 MRPL48Q96GC5 212 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 BORCS6Q96GS4 357 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 SNX27Q96L92 541 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 QRFPRQ96P65 431 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 EIF2B3Q9NR50 452 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 ARPC2O15144 300 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 FABP3P05413 133 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 RCVRNP35243 200 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 DGKEP52429 567 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 OLR1P78380 273 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 TRIM32Q13049 653 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 MAP2K5Q13163 448 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 CHIT1Q13231 466 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■■■■□ 20.4
TCF3-201ENST00000262965 NDUFAF6Q330K2 333 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 MBLAC2Q68D91 279 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.41□□□□□ -0.26
TCF3-201ENST00000262965 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 RAB2BQ8WUD1 216 aa13.41□□□□□ -0.26
TCF3-201ENST00000262965 GPR88Q9GZN0 384 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms