RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ANXA6P08133 673 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 G6PDP11413 515 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 JUNBP17275 347 aaPredicted RBP15.73■□□□□ 0.11
LMNB1-201ENST00000261366 HTR6P50406 440 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 EEFSECP57772 596 aaKnown RBP15.73■□□□□ 0.11
LMNB1-201ENST00000261366 SNX17Q15036 470 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 UBXN11Q5T124 520 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 MARC1Q5VT66 337 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 TMEM179BQ7Z7N9 219 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 SCAIQ8N9R8 606 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 MYOCQ99972 504 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 SLC25A51Q9H1U9 297 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 SP110Q9HB58 689 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 ERVK-18Q9QC07 812 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 ADGRE2Q9UHX3 823 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 COMMD10Q9Y6G5 202 aa15.73■□□□□ 0.11
LMNB1-201ENST00000261366 PSMD11O00231 422 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SLC1A7O00341 560 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 GABRDO14764 452 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 CHEK2O96017 543 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 RAP2AP10114 183 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SMPD1P17405 629 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 FDXRP22570 491 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 TCEA1P23193 301 aaKnown RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 CDKN1CP49918 316 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 TUBA3CQ13748 450 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SLC14A2Q15849 920 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 CATSPEREQ5SY80 951 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 LAIR2Q6ISS4 152 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 PAGE2Q7Z2X7 111 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 ANKRD13BQ86YJ7 626 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 HID1Q8IV36 788 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SCML4Q8N228 414 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 PAPD5Q8NDF8 572 aaKnown RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 STARD8Q92502 1023 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SMARCD1Q96GM5 515 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 MAGED4Q96JG8 741 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SMOC2Q9H3U7 446 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 B3GNT3Q9Y2A9 372 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 ACTL7AQ9Y615 435 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 TSC2P49815 1807 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 PDHXO00330 501 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 SLC7A4O43246 635 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 FADS2O95864 444 aaKnown RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 MYL3P08590 195 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 HTR1EP28566 365 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 GSSP48637 474 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 EMX1Q04741 257 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 EMX2Q04743 252 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 FOXM1Q08050 763 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 RBM48Q5RL73 367 aaKnown RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 C6orf136Q5SQH8 315 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 TTC23Q5W5X9 447 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 NANOGNBQ7Z5D8 188 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 MILR1Q7Z6M3 343 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 PHACTR4Q8IZ21 702 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 CLIP4Q8N3C7 705 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 MCOLN3Q8TDD5 553 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 ELMO1Q92556 727 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 MFSD1Q9H3U5 465 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 KIAA1522Q9P206 1035 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 POLR3HQ9Y535 204 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-201ENST00000261366 HS3ST4Q9Y661 456 aa15.72■□□□□ 0.11
LMNB1-201ENST00000261366 LDB2O43679 373 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 UGT2B11O75310 529 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 PRKD3O94806 890 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 NR4A2P43354 598 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 PRKG2Q13237 762 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 RAB41Q5JT25 222 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 IL27RAQ6UWB1 636 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 PROSER1Q86XN7 944 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 GOLM1Q8NBJ4 401 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 CAPSLQ8WWF8 208 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 HDAC2Q92769 488 aaKnown RBP15.71■□□□□ 0.11
LMNB1-201ENST00000261366 FAM162AQ96A26 154 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 GPR21Q99679 349 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 IKZF5Q9H5V7 419 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 MARCH7Q9H992 704 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 AKIP1Q9NQ31 210 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 COMMD8Q9NX08 183 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-201ENST00000261366 VAPAQ9P0L0 249 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 ZMYM5Q9UJ78 669 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 LOC285556D6RIA3 1793 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 LOC100130705A0A1B0GUX0 176 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 ZNF99A8MXY4 864 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-201ENST00000261366 ARVCFO00192 962 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 IRAK2O43187 625 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 TREHO43280 583 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 MMP3P08254 477 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 HMBSP08397 361 aa15.71■□□□□ 0.11
LMNB1-201ENST00000261366 ENO2P09104 434 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-201ENST00000261366 CNPP09543 421 aaKnown RBP15.71■□□□□ 0.11
LMNB1-201ENST00000261366 SMIM10L2AP0DMW4 78 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms