RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 MED27Q6P2C8 311 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 KLHL35Q6PF15 583 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 BEND5Q7L4P6 421 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 OR2T34Q8NGX1 318 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 OR2T3Q8NH03 318 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 WDR60Q8WVS4 1066 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 HTRA1Q92743 480 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GTPBP3Q969Y2 492 aaKnown RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 POLE3Q9NRF9 147 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 COLEC10Q9Y6Z7 277 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 FAM86C2PA6NEL3 165 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 PRODHO43272 600 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 METTL18O95568 372 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 NFATC1O95644 943 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 NR2F6P10588 404 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 NR4A1P22736 598 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 CMPK1P30085 196 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TTKP33981 857 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 RYKP34925 604 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GNA12Q03113 381 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 VSTM1Q6UX27 236 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 NAPRTQ6XQN6 538 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF662Q6ZS27 426 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GALNTL5Q7Z4T8 443 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ATCAYQ86WG3 371 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF483Q8TF39 744 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 AGAP2Q99490 1192 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GAS2L1Q99501 681 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 FZD10Q9ULW2 581 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 CPQQ9Y646 472 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 C5orf60A6NFR6 353 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TMEM88BA6NKF7 163 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 SLC38A8A6NNN8 435 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GNB5O14775 395 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 DCLK1O15075 740 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 STK16O75716 305 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ACRP10323 421 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 MAPK12P53778 367 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 MC1RQ01726 317 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 LIPEQ05469 1076 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ELP6Q0PNE2 266 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 DPYSQ14117 519 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GHDCQ8N2G8 530 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 PQLC1Q8N2U9 271 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 RNF31Q96EP0 1072 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 KLHL32Q96NJ5 620 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 PLGRKTQ9HBL7 147 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 NFAT5O94916 1531 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 GSC2O15499 205 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 PUDPQ08623 228 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 HKDC1Q2TB90 917 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 UBXN11Q5T124 520 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TMEM220Q6QAJ8 160 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF781Q8N8C0 355 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 FAM110BQ8TC76 370 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TFAP2BQ92481 460 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 DPEP2Q9H4A9 486 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 CCDC177Q9NQR7 707 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 SIRPGQ9P1W8 387 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 SH3PXD2AQ5TCZ1 1133 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TBC1D21Q8IYX1 336 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 BEND7Q8N7W2 519 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 RBM15BQ8NDT2 890 aaKnown RBP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 METTL21AQ8WXB1 218 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 LPGAT1Q92604 370 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 SDCBP2Q9H190 292 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ARHGEF4Q9NR80 690 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 TBC1D14Q9P2M4 693 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ING4Q9UNL4 249 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 FADS3Q9Y5Q0 445 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 PIP5K1BO14986 540 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 SERPINA1P01009 418 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MASP1P48740 699 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 GDF10P55107 478 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 LARS2Q15031 903 aaKnown RBP11.97□□□□□ -0.49
COL8A1-201ENST00000261037 PITRM1Q5JRX3 1037 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 AAGABQ6PD74 315 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 SMARCD3Q6STE5 483 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 RNF19BQ6ZMZ0 732 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MCEMP1Q8IX19 187 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 UNC5BQ8IZJ1 945 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 SETD6Q8TBK2 473 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 ARNTL2Q8WYA1 636 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 HPS1Q92902 700 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 TMLHEQ9NVH6 421 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 LRRC72A6NJI9 287 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 TGDSO95455 350 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 PGDP52209 483 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 FAM110CQ1W6H9 321 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 LRTOMTQ8WZ04 291 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 KCNN2Q9H2S1 579 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 FAM83DQ9H4H8 585 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 TESMINQ9Y4I5 508 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 ELOVL7A1L3X0 281 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MYBPHLA2RUH7 354 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 LYPLA2O95372 231 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 S100GP29377 79 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms