RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ARL10Q8N8L6 244 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 MCUQ8NE86 351 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 OR13J1Q8NGT2 312 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 PEX13Q92968 403 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ULK4Q96C45 1275 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 FAM96AQ9H5X1 160 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 CHRAC1Q9NRG0 131 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 SPATS2LQ9NUQ6 558 aaKnown RBP16.53■□□□□ 0.24
SDCBP-201ENST00000260130 SIRPGQ9P1W8 387 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 GULP1Q9UBP9 304 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 SLC2A6Q9UGQ3 507 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 CRLS1Q9UJA2 301 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 SPTBN2O15020 2390 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ARSDP51689 593 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 CRADDP78560 199 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ILKQ13418 452 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ZRANB3Q5FWF4 1079 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 LRRTM4Q86VH4 590 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 TAX1BP1Q86VP1 789 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 NAT8LQ8N9F0 302 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 GRHL1Q9NZI5 618 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 KMOO15229 486 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 RGS16O15492 202 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-201ENST00000260130 AVILO75366 819 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 MLNP12872 115 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 ACP5P13686 325 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 MSH3P20585 1137 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 DRD4P21917 467 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 MGAT1P26572 445 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 ACVR1Q04771 509 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 CRTC3Q6UUV7 619 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 CAND1Q86VP6 1230 aaKnown RBP16.52■□□□□ 0.24
SDCBP-201ENST00000260130 NXPE1Q8N323 547 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 RASGEF1AQ8N9B8 481 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 GPR156Q8NFN8 814 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 ADAMTS14Q8WXS8 1223 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 HDAC10Q969S8 669 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 TMEM109Q9BVC6 243 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 XAB2Q9HCS7 855 aaKnown RBP16.52■□□□□ 0.24
SDCBP-201ENST00000260130 PADI4Q9UM07 663 aa16.52■□□□□ 0.24
SDCBP-201ENST00000260130 MED19A0JLT2 244 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 CPED1A4D0V7 1026 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 EME2A4GXA9 379 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 RFPL3O75679 317 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 SHBGP04278 402 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 CDK4P11802 303 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 AKT1P31749 480 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 RPL21P46778 160 aaKnown RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 CDKN1CP49918 316 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 CACNG1Q06432 222 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 LACTB2Q53H82 288 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 RNASEH2BQ5TBB1 312 aaKnown RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 TAS2R42Q7RTR8 314 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 PCGF5Q86SE9 256 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 KYQ8NBH2 561 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 SYBUQ9NX95 663 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 TRBV5-4A0A0C4DH59 114 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC162PA2VCL2 907 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 B4DGG1 531 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 GOLGA8MH3BSY2 632 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-201ENST00000260130 IVDP26440 423 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 SLC29A2Q14542 456 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 TRAPPC5Q8IUR0 188 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 HEXDCQ8WVB3 486 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 SERPINB12Q96P63 405 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 COPS8Q99627 209 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 KIFC1Q9BW19 673 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 YY1AP1Q9H869 796 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 LRRC4CQ9HCJ2 640 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 SLC23A2Q9UGH3 650 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 KCNK6Q9Y257 313 aa16.51■□□□□ 0.23
SDCBP-201ENST00000260130 TLDC2A0PJX2 215 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 NOBOXO60393 691 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 CHN1P15882 459 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ZNF7P17097 686 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 FOXC1Q12948 553 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 SERPINA9Q86WD7 417 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 SFTPA2Q8IWL1 248 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 PIANPQ8IYJ0 282 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ANKS4BQ8N8V4 417 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 DCUN1D1Q96GG9 259 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ZNF514Q96K75 400 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 OR51F1A6NGY5 319 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 RASSF9O75901 435 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 GOT2P00505 430 aaKnown RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 GP1BAP07359 652 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 PRSS56P0CW18 603 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 RALBP11234 206 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ACRV1P26436 265 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 CLCNKAP51800 687 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms