RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 SLC13A3Q8WWT9 602 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 FAM168AQ92567 244 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 PRCCQ92733 491 aaPredicted RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 DNASE1L2Q92874 299 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 EXT2Q93063 718 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 SPACA9Q96E40 222 aaPredicted RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 USP28Q96RU2 1077 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 ZNF347Q96SE7 839 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 HNRNPABQ99729 332 aaKnown RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 LRRC2Q9BYS8 371 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 NYXQ9GZU5 481 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 ZNF350Q9GZX5 532 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 KCNK15Q9H427 330 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 TUFT1Q9NNX1 390 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 PAPOLBQ9NRJ5 636 aaKnown RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 STX8Q9UNK0 236 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 AURKCQ9UQB9 309 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 TNFSF13BQ9Y275 285 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 USP16Q9Y5T5 823 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 EPN1Q9Y6I3 576 aaPredicted RBP5.06□□□□□ -1.6
TCN1-201ENST00000257264 SLC30A1Q9Y6M5 507 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 TMEM94Q12767 1356 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 C1orf167Q5SNV9 1468 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 NUP188Q5SRE5 1749 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 MAST3O60307 1309 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 PCDH11XQ9BZA7 1347 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 PCDH11YQ9BZA8 1340 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 SALL1Q9NSC2 1324 aa5.06□□□□□ -1.6
TCN1-201ENST00000257264 A0A1B0GUL7 405 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 TYW5A2RUC4 315 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC9B1P1A6NJY1 282 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ERVV-2B6SEH9 535 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 H0YIN7 160 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 CLIC1O00299 241 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 IKBKBO14920 756 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 EIF3DO15371 548 aaKnown RBP eCLIP5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC25A17O43808 307 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 HYAL3O43820 417 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 RSL1D1O76021 490 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 SMC2O95347 1197 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 CTDNEP1O95476 244 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ALPPP05187 535 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 TPM1P09493 284 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ALPPL2P10696 532 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 VPREB1P12018 145 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 RPS2P15880 293 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 PRLRP16471 622 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 FERP16591 822 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 DNASE1P24855 282 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 YWHAQP27348 245 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SHMT1P34896 483 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 RYKP34925 604 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 CTNNB1P35222 781 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 GPR143P51810 404 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SIRPAP78324 504 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 GABPB1Q06547 395 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 NCBP1Q09161 790 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 KRT33BQ14525 404 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SSPNQ14714 243 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 PKN1Q16512 942 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 MDH1BQ5I0G3 518 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 VWA1Q6PCB0 445 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 DHRS13Q6UX07 377 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 STOX1Q6ZVD7 989 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ATG9AQ7Z3C6 839 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 HAUS6Q7Z4H7 955 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 WDR53Q7Z5U6 358 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 LDB1Q86U70 411 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 WDR5BQ86VZ2 330 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 CADM3Q8N126 398 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 TMEM217Q8N7C4 229 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 LINC01465Q8N7H1 131 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC4A11Q8NBS3 891 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 LINC00301Q8NCQ3 95 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 DENND6BQ8NEG7 585 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ZNF397Q8NF99 534 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 NEK11Q8NG66 645 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 RASSF8Q8NHQ8 419 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 TRPC4APQ8TEL6 797 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 HDAC7Q8WUI4 952 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ROBO4Q8WZ75 1007 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 WASF1Q92558 559 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 CELF1Q92879 486 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 MIB2Q96AX9 1013 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 ZC3HAV1LQ96H79 300 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 GNRHR2Q96P88 292 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 ABHD6Q9BV23 337 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 TEX13AQ9BXU3 409 aaPredicted RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 DNAJC18Q9H819 358 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 C17orf75Q9HAS0 396 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC28A3Q9HAS3 691 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 EPB41L5Q9HCM4 733 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 POLE3Q9NRF9 147 aa5.05□□□□□ -1.6
TCN1-201ENST00000257264 DNAJC17Q9NVM6 304 aaKnown RBP5.05□□□□□ -1.6
TCN1-201ENST00000257264 SLC24A2Q9UI40 661 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms