RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KRTCAP2Q8N6L1 136 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 TNIP2Q8NFZ5 429 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 SEPT3Q9UH03 358 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 PRAMEF12O95522 483 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 SPIDRQ14159 915 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 SERINC5Q86VE9 423 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 OR4F6Q8NGB9 312 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 PNPT1Q8TCS8 783 aaKnown RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 MYOCQ99972 504 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 CIPCQ9C0C6 399 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 ARNT2Q9HBZ2 717 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 OTOFQ9HC10 1997 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 ASPDHA6ND91 283 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 NBNO60934 754 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 LPOP22079 712 aaPredicted RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 RFC2P35250 354 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 CCT8P50990 548 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 C21orf59P57076 290 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 TGFBIQ15582 683 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 ZBED5Q49AG3 693 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 GALNT18Q6P9A2 607 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 DET1Q7L5Y6 550 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 ZDHHC13Q8IUH4 622 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 TDRD1Q9BXT4 1180 aaKnown RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 TFB2MQ9H5Q4 396 aaKnown RBP13.34□□□□□ -0.27
VHL-201ENST00000256474 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
VHL-201ENST00000256474 ADGRE2Q9UHX3 823 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 SCML2Q9UQR0 700 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 DLGAP1O14490 977 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 ESRRBO95718 433 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TCF3P15923 654 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 ABRAXAS2Q15018 415 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 PATL1Q86TB9 770 aaKnown RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 SFRP1Q8N474 314 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 MINDY1Q8N5J2 469 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TOP1MTQ969P6 601 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 ZBTB18Q99592 522 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 NPLQ9BXD5 320 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 INVSQ9Y283 1065 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 EYSQ5T1H1 3165 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 K7ERQ8 282 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 M0QZQ0 153 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 INSIG1O15503 277 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 PIM1P11309 404 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 MYCLP1P12525 358 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 SHMT2P34897 504 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 NEK2P51955 445 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 IL5RAQ01344 420 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 MAPK11Q15759 364 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 CYP20A1Q6UW02 462 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TRIB2Q92519 343 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 SLC39A13Q96H72 371 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 ZFC3H1O60293 1989 aaKnown RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 LOC285095A0A1B0GVY8 99 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 H3BMQ9 156 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 UROSP10746 265 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 CASP9P55211 416 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 RHOAP61586 193 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TRIP4Q15650 581 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 FAM98BQ52LJ0 330 aaKnown RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
VHL-201ENST00000256474 GPR180Q86V85 440 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 OR2T12Q8NG77 320 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 FEM1CQ96JP0 617 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 COG8Q96MW5 612 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 ARMC1Q9NVT9 282 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 AIG1Q9NVV5 245 aa13.33□□□□□ -0.28
VHL-201ENST00000256474 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
VHL-201ENST00000256474 PAPSS2O95340 614 aaPredicted RBP13.32□□□□□ -0.28
VHL-201ENST00000256474 AGXTP21549 392 aa13.32□□□□□ -0.28
VHL-201ENST00000256474 HOXC13P31276 330 aa13.32□□□□□ -0.28
VHL-201ENST00000256474 TNK2Q07912 1038 aa13.32□□□□□ -0.28
VHL-201ENST00000256474 MAPKAPK3Q16644 382 aa13.32□□□□□ -0.28
VHL-201ENST00000256474 PARP15Q460N3 678 aa13.32□□□□□ -0.28
VHL-201ENST00000256474 SPANXN4Q5MJ08 99 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms