RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 HCRTO43612 131 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CXXC5Q7LFL8 322 aaKnown RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 TIFAQ96CG3 184 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 GAL3ST1Q99999 423 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CNPPD1Q9BV87 410 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CRNNQ9UBG3 495 aaPredicted RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 C2CD4BA6NLJ0 364 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC26A3P40879 764 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 ASPAP45381 313 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PPP2R2BQ00005 443 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 SMARCD3Q6STE5 483 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 SPATA19Q7Z5L4 167 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PCDH19Q8TAB3 1148 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CFHP08603 1231 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC25A51Q9H1U9 297 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 TRIM39Q9HCM9 518 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PNPLA3Q9NST1 481 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 MAGEL2Q9UJ55 1249 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CDH22Q9UJ99 828 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PCDHGC3Q9UN70 934 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 LRRC72A6NJI9 287 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CSKP41240 450 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 DGKGP49619 791 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 POU5F1Q01860 360 aaKnown RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 DCTN2Q13561 401 aaKnown RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 RGS21Q2M5E4 152 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 ZYG11AQ6WRX3 759 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 ARHGAP22Q7Z5H3 698 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CTU1Q7Z7A3 348 aaKnown RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 OSBPL11Q9BXB4 747 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 C9P02748 559 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PRNPP04156 253 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 GIMD1P0DJR0 217 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 ELP6Q0PNE2 266 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 UBXN2BQ14CS0 331 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 AMZ1Q400G9 498 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 TSTD2Q5T7W7 516 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PQLC1Q8N2U9 271 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 MPP5Q8N3R9 675 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 OR13C4Q8NGS5 318 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 FAR1Q8WVX9 515 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 A0A075B6Q4 140 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 VNN1O95497 513 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PTPN2P17706 415 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 MASP1P48740 699 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 LIPEQ05469 1076 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 PCBP2Q15366 365 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■■■ 38.5
SMARCC1-201ENST00000254480 CARTPTQ16568 116 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 OR10H5Q8NGA6 315 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CYB5D2Q8WUJ1 264 aa18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 MTERF1Q99551 399 aaKnown RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CLK4Q9HAZ1 481 aaKnown RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 CCDC177Q9NQR7 707 aaPredicted RBP18.5■□□□□ 0.55
SMARCC1-201ENST00000254480 TEX28O15482 410 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 OLFML2AQ68BL7 652 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 RTL4Q6ZR62 310 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 KREMEN2Q8NCW0 462 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 MIOSQ9NXC5 875 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 RAPGEFL1Q9UHV5 662 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 TESMINQ9Y4I5 508 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 PSMD9O00233 223 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 HCN1O60741 890 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UGT1A6P19224 532 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UGT1A1P22309 533 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UGT1A4P22310 534 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UGT1A3P35503 534 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UGT1A5P35504 534 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 JAZF1Q86VZ6 243 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 PYCR2Q96C36 320 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 LENG8Q96PV6 779 aaPredicted RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 TDRD1Q9BXT4 1180 aaKnown RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 OR2AG1Q9H205 316 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 FBXW11Q9UKB1 542 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 PRPF19Q9UMS4 504 aaKnown RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 FADS3Q9Y5Q0 445 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 CCNDBP1O95273 360 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 CDK9P50750 372 aaKnown RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 RALGPS1Q5JS13 557 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 MED27Q6P2C8 311 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 OR10A6Q8NH74 314 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 HEPHQ9BQS7 1158 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 C11orf16Q9NQ32 467 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 NADKO95544 446 aaPredicted RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 ALPIP09923 528 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 PAX3P23760 479 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 IGFBP5P24593 272 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 LIMK2P53671 638 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 CRHR2Q13324 411 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 GCNT6Q5T4J0 391 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 KLHL35Q6PF15 583 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 GPER1Q99527 375 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 RSL24D1Q9UHA3 163 aaKnown RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 SAMD4AQ9UPU9 718 aaKnown RBP18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 HDDC3Q8N4P3 179 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 UBAP1Q9NZ09 502 aa18.49■□□□□ 0.55
SMARCC1-201ENST00000254480 DCLK1O15075 740 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 LAMP2P13473 410 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 TCF4P15884 667 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms