RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 APOBEC4Q8WW27 367 aaKnown RBP10.13□□□□□ -0.79
VPS50-201ENST00000251739 KLHL6Q8WZ60 621 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 TEKT5Q96M29 485 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 AGAP3Q96P47 875 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
VPS50-201ENST00000251739 RAB33BQ9H082 229 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 OSGEPL1Q9H4B0 414 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 ANAPC2Q9UJX6 822 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 RPS6KL1Q9Y6S9 549 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 TNRC6AQ8NDV7 1962 aaKnown RBP10.13□□□□□ -0.79
VPS50-201ENST00000251739 DOPEY1Q5JWR5 2465 aa10.13□□□□□ -0.79
VPS50-201ENST00000251739 LOC285095A0A1B0GVY8 99 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 OR52A4PA6NMU1 304 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 PDZK1P1A8MUH7 402 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 GAPDHSO14556 408 aaPredicted RBP10.12□□□□□ -0.79
VPS50-201ENST00000251739 LCE2BO14633 110 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
VPS50-201ENST00000251739 KIF1CO43896 1103 aaKnown RBP10.12□□□□□ -0.79
VPS50-201ENST00000251739 CDK14O94921 469 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 VIPP01282 170 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 TYRP1P17643 537 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 DMPKQ09013 629 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 WASHC5Q12768 1159 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 IL11RAQ14626 422 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 PCSK7Q16549 785 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS50-201ENST00000251739 ATP13A5Q4VNC0 1218 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 COLEC12Q5KU26 742 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 MFSD7Q6UXD7 560 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 KDELC2Q7Z4H8 507 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 OR8K1Q8NGG5 319 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 ABHD17AQ96GS6 310 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 SLC41A2Q96JW4 573 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 TGM7Q96PF1 710 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 SRPK1Q96SB4 655 aaKnown RBP10.12□□□□□ -0.79
VPS50-201ENST00000251739 GPR63Q9BZJ6 419 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 IL26Q9NPH9 171 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 DNAJC16Q9Y2G8 782 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 WDR37Q9Y2I8 494 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 PCDHGA6Q9Y5G7 932 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS50-201ENST00000251739 MRPS18BQ9Y676 258 aaKnown RBP10.12□□□□□ -0.79
VPS50-201ENST00000251739 KCNMB2Q9Y691 235 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
VPS50-201ENST00000251739 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 PMPCBO75439 489 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 SNRNP200O75643 2136 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 RECKO95980 971 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 EPOP01588 193 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 SLC4A1P02730 911 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 KRT1P04264 644 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 FURINP09958 794 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 PECAM1P16284 738 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 ZFXP17010 805 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 NELFEP18615 380 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 TCN2P20062 427 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 IDSP22304 550 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 RPL10P27635 214 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 CA5AP35218 305 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 CDKN2BP42772 138 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 NR2C2P49116 596 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 PPM1FP49593 454 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 DRG2P55039 364 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 PPP1CAP62136 330 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 LAMB3Q13751 1172 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 TRIM14Q14142 442 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 NOMO1Q15155 1222 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 SEPT7Q16181 437 aaKnown RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 DEFB109BQ30KR1 87 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 C6orf15Q6UXA7 325 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 TRIM48Q8IWZ4 208 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 RHOT2Q8IXI1 618 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 GALNT6Q8NCL4 622 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 DDHD1Q8NEL9 900 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 GPR150Q8NGU9 434 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 OXNAD1Q96HP4 312 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 OR6C1Q96RD1 312 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 CHP1Q99653 195 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 TRABDQ9H4I3 376 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
VPS50-201ENST00000251739 IL17CQ9P0M4 197 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 KCTD3Q9Y597 815 aa10.11□□□□□ -0.79
VPS50-201ENST00000251739 GOLGA6L19H0YKK7 550 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 GPR39O43194 453 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 AKR1B10O60218 316 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 KCNJ13O60928 360 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 KIAA0754O94854 1291 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 NDUFA10O95299 355 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 TIAF1O95411 115 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 AMD1P17707 334 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 NFKB1P19838 968 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 DLSTP36957 453 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 SLC1A1P43005 524 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 CHRNA4P43681 627 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 SEPHS1P49903 392 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms