RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ARSIQ5FYB1 569 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PIGGQ5H8A4 983 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 TCEAL5Q5H9L2 206 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 AAGABQ6PD74 315 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PAOXQ6QHF9 649 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 FUNDC1Q8IVP5 155 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PDPRQ8NCN5 879 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 OSCP1Q8WVF1 389 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 ZNF382Q96SR6 550 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 MRPL1Q9BYD6 325 aaKnown RBP18.22■□□□□ 0.51
HOXC11-201ENST00000243082 OARD1Q9Y530 152 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 RAD51BO15315 384 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 CFLARO15519 480 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 CRCPO75575 148 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 SNRPB2P08579 225 aaKnown RBP18.22■□□□□ 0.51
HOXC11-201ENST00000243082 ADH5P11766 374 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 NNMTP40261 264 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 VHLP40337 213 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 DGKGP49619 791 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 CDC16Q13042 620 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 ZNF423Q2M1K9 1284 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 LRRC74BQ6ZQY2 392 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 GPRIN3Q6ZVF9 776 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 C12orf40Q86WS4 652 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 OR52B6Q8NGF0 335 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 DLG3Q92796 817 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 TUBGCP3Q96CW5 907 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 ZNF570Q96NI8 536 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 ANKRD27Q96NW4 1050 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 SERPINI1Q99574 410 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 FAM126AQ9BYI3 521 aaPredicted RBP18.22■□□□□ 0.51
HOXC11-201ENST00000243082 S100A14Q9HCY8 104 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 CD84Q9UIB8 345 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PTBP2Q9UKA9 531 aaKnown RBP18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PPM1HQ9ULR3 514 aa18.22■□□□□ 0.51
HOXC11-201ENST00000243082 TNPO3Q9Y5L0 923 aaKnown RBP18.22■□□□□ 0.51
HOXC11-201ENST00000243082 PIKFYVEQ9Y2I7 2098 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 TSPAN11A1L157 253 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 TAPBPO15533 448 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 TIMP2P16035 220 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 LBPP18428 481 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 VASPP50552 380 aaPredicted RBP18.21■□□□□ 0.51
HOXC11-201ENST00000243082 THOP1P52888 689 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 ERVPABLB-1P60509 514 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 CEACAM7Q14002 265 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 LRP8Q14114 963 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 PHKG1Q16816 387 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 C9orf50Q5SZB4 431 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 TMC5Q6UXY8 1006 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 JADE3Q92613 823 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 ULK4Q96C45 1275 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 NSUN3Q9H649 340 aaKnown RBP18.21■□□□□ 0.51
HOXC11-201ENST00000243082 ELOVL2Q9NXB9 296 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 CACNA2D2Q9NY47 1150 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 MCM8Q9UJA3 840 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 ANGPTL2Q9UKU9 493 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 ST14Q9Y5Y6 855 aa18.21■□□□□ 0.51
HOXC11-201ENST00000243082 HOXC11O43248 304 aaPredicted RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 VPS4BO75351 444 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 OR4F21O95013 312 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 RPSAP08865 295 aaKnown RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PRR35P0CG20 571 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 HGFP14210 728 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 ZNF30P17039 623 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 VIPR1P32241 457 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PKNOX1P55347 436 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 STX1BP61266 288 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 ARHGEF7Q14155 803 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 CRY1Q16526 586 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 XKR7Q5GH72 579 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 REP15Q6BDI9 236 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 GOLGA7Q7Z5G4 137 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 HSD11B1LQ7Z5J1 315 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PYDC1Q8WXC3 89 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 ACOX2Q99424 681 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 SLC25A23Q9BV35 468 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 NOL11Q9H8H0 719 aaKnown RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PCDH12Q9NPG4 1184 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PKD2L2Q9NZM6 624 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 MBD1Q9UIS9 605 aaPredicted RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 PCDHGA7Q9Y5G6 932 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 GUCA1CO95843 209 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 S100BP04271 92 aaPredicted RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 SRPRAP08240 638 aaKnown RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 CCR7P32248 378 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 ERVK-21P61565 698 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 LETMD1Q6P1Q0 360 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 EFL1Q7Z2Z2 1120 aaKnown RBP18.2■□□□□ 0.5
HOXC11-201ENST00000243082 DCBLD1Q8N8Z6 715 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 SLC26A7Q8TE54 656 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 CDK15Q96Q40 435 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 MCOLN1Q9GZU1 580 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 NMRK1Q9NWW6 199 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 KCTD5Q9NXV2 234 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 KLHL42Q9P2K6 505 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 IL36AQ9UHA7 158 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
HOXC11-201ENST00000243082 CDH23Q9H251 3354 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 UPK3BL1B0FP48 263 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms