RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C1orf216Q8TAB5 229 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 THAP6Q8TBB0 222 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PIGXQ8TBF5 258 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 NFASCO94856 1347 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 TBX10O75333 385 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 CETPP11597 493 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 FUT4P22083 530 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 ITPKAP23677 461 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 HNRNPH3P31942 346 aaKnown RBP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 CXCR3P49682 368 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 MFSD10Q14728 455 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PGM5Q15124 567 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PITRM1Q5JRX3 1037 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 HECTD2Q5U5R9 776 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 SLC30A6Q6NXT4 461 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 POMZP3Q6PJE2 187 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 ADGRD1Q6QNK2 874 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 OR2L8Q8NGY9 312 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 EXOC2Q96KP1 924 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 UXTQ9UBK9 157 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 ASF1AQ9Y294 204 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PXDNLA1KZ92 1463 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 FGF1P05230 155 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 C8BP07358 591 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 CTSEP14091 401 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 KCNA5P22460 613 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 HSD3B2P26439 372 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 CSTF2P33240 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 UBAP2Q5T6F2 1119 aaKnown RBP13.72□□□□□ -0.21
TARDBP-201ENST00000240185 HDDC3Q8N4P3 179 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 KCTD7Q96MP8 289 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 DNAJB9Q9UBS3 223 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 PCDHGB3Q9Y5G1 929 aa13.72□□□□□ -0.21
TARDBP-201ENST00000240185 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CXCR6O00574 342 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CD247P20963 164 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 GNG2P59768 71 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 NPTX1Q15818 432 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 SDR16C5Q8N3Y7 309 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 RASGEF1CQ8N431 466 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF781Q8N8C0 355 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CXorf40AQ8TE69 158 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CCDC120Q96HB5 630 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF717Q9BY31 904 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 OR51V1Q9H2C8 321 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 DPAGT1Q9H3H5 408 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 EXO5Q9H790 373 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 RAP2AP10114 183 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 STOMP27105 288 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 IDH3AP50213 366 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CDH15P55291 814 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 RPP38P78345 283 aaKnown RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 TMC8Q8IU68 726 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 GJD3Q8N144 294 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 SUSD6Q92537 303 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 MSANTD3Q96H12 275 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 FUZQ9BT04 418 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 FARSAQ9Y285 508 aaKnown RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 EML1O00423 815 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CKMT2P17540 419 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 GRIK4Q16099 956 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 IQCCQ4KMZ1 466 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF782Q6ZMW2 699 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-201ENST00000240185 PIGZQ86VD9 579 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 CADM2Q8N3J6 435 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 NETO2Q8NC67 525 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 MFSD14AQ96MC6 490 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
TARDBP-201ENST00000240185 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 PSMD9O00233 223 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 RPLP2P05387 115 aaKnown RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 CSN2P05814 226 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 CTPS1P17812 591 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 PTX3P26022 381 aaPredicted RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF132P52740 706 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 VAMP2P63027 116 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF829Q3KNS6 432 aaPredicted RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 RBM48Q5RL73 367 aaKnown RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 FAM151BQ6UXP7 276 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 IRF2BP2Q7Z5L9 587 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 OR5K1Q8NHB7 308 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 PFDN5Q99471 154 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 SMURF2Q9HAU4 748 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.22
TARDBP-201ENST00000240185 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.22
TARDBP-201ENST00000240185 MAB21L2Q9Y586 359 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms