RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PHF21AQ96BD5 680 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 OR52E6Q96RD3 313 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SLC39A8Q9C0K1 460 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ERVK13-1Q9NX77 482 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PAQR5Q9NXK6 330 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 GMIPQ9P107 970 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 IKZF3Q9UKT9 509 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 A0A1W2PQ67 120 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF701M0R085 212 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SLC1A7O00341 560 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CD3EAPO15446 510 aaKnown RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 VPS26AO75436 327 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 LCP2Q13094 533 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SDE2Q6IQ49 451 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF486Q96H40 463 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 TRIM54Q9BYV2 358 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 MARCH4Q9P2E8 410 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ELOVL7A1L3X0 281 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 MYBPHLA2RUH7 354 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SULT1C4O75897 302 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 GPX3P22352 226 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SLC26A3P40879 764 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 KCNC1P48547 511 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 GMPSP49915 693 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CDKN2DP55273 166 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CACHD1Q5VU97 1274 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SZRD1Q7Z422 152 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 IL37Q9NZH6 218 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ARL5AQ9Y689 179 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 DOT1LQ8TEK3 1739 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CHRNA1P02708 482 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 G6PDP11413 515 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 GRM5P41594 1212 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 YBX1P67809 324 aaKnown RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 EFEMP1Q12805 493 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CPSF6Q16630 551 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 KYAT1Q16773 422 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 SNAP47Q5SQN1 464 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 LCN8Q6JVE9 175 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 TAGAPQ8N103 731 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
PRDM4-201ENST00000228437 CD300AQ9UGN4 299 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 DUSP12Q9UNI6 340 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 UGT2A1Q9Y4X1 527 aa14.38□□□□□ -0.11
PRDM4-201ENST00000228437 C19orf81C9J6K1 198 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 CRHBPP24387 322 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 MRPL28Q13084 256 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 RAPSNQ13702 412 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ARHGEF7Q14155 803 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 DTWD1Q8N5C7 304 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 TTC29Q8NA56 475 aaPredicted RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 CGREF1Q99674 301 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 TRIT1Q9H3H1 467 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 DSN1Q9H410 356 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF451Q9Y4E5 1061 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 CXCR6O00574 342 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 UBFD1O14562 309 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ZW10O43264 779 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 LGALS2P05162 132 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ITIH1P19827 911 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 RAB25P57735 213 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 HID1Q8IV36 788 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 C7orf57Q8NEG2 295 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 KIFC1Q9BW19 673 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 DNAJB9Q9UBS3 223 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 PAGE1O75459 146 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 PIGAP37287 484 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ARSDP51689 593 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF404Q494X3 552 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 SLC27A1Q6PCB7 646 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 TAC4Q86UU9 113 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 MFSD6LQ8IWD5 586 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 DNAJB3Q8WWF6 145 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 SENP8Q96LD8 212 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 GFM1Q96RP9 751 aaKnown RBP14.37□□□□□ -0.11
PRDM4-201ENST00000228437 OSBPL10Q9BXB5 764 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 PRKAB1Q9Y478 270 aa14.37□□□□□ -0.11
PRDM4-201ENST00000228437 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 GOT2P00505 430 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TCF3P15923 654 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 RACK1P63244 317 aaKnown RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 TUBA3CQ13748 450 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 PTGR1Q14914 329 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 OXA1LQ15070 435 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 VASH1Q7L8A9 365 aaPredicted RBP14.36□□□□□ -0.11
PRDM4-201ENST00000228437 LRRC49Q8IUZ0 686 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 FLCNQ8NFG4 579 aa14.36□□□□□ -0.11
PRDM4-201ENST00000228437 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms