RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NXNL1Q96CM4 212 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 FAM192AQ9GZU8 254 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 A8MUA0 341 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GNB5O14775 395 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 FPGSQ05932 587 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 DCST1Q5T197 706 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 SPPL2CQ8IUH8 684 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 A0A1W2PPM1 405 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 TNFRSF11BO00300 401 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 AP5Z1O43299 807 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 TLX3O43711 291 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 WFS1O76024 890 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 MT-CYBP00156 380 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ITGB5P18084 799 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 IL12AP29459 219 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ALDH4A1P30038 563 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 BLKP51451 505 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 PRR5P85299 388 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 OC90Q02509 493 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 FSTL1Q12841 308 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 SWI5Q1ZZU3 235 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 OR52J3Q8NH60 311 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 DNAJC19Q96DA6 116 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GPN1Q9HCN4 374 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 DMTF1Q9Y222 760 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 PCDHGC4Q9Y5F7 938 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 PTPN20Q4JDL3 420 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ANKFN1Q8N957 763 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PIGXQ8TBF5 258 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 AREL1O15033 823 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 SYN1P17600 705 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PRKCZQ05513 592 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 INAVAQ3KP66 663 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ALG1LQ6GMV1 187 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 COX18Q8N8Q8 333 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 NUS1Q96E22 293 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 COMMD4Q9H0A8 199 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 C11orf16Q9NQ32 467 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 AP2A2O94973 939 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 HSF2Q03933 536 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PDK4Q16654 411 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 MOCS1Q9NZB8 636 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 A8MU76 341 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PEX10O60683 326 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 SMPD1P17405 629 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 AGXTP21549 392 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CPN2P22792 545 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ADRA1BP35368 520 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 GRK6P43250 576 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 DLG1Q12959 904 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 NFATC2Q13469 925 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 LDLRAP1Q5SW96 308 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 STK16O75716 305 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 KRT36O76013 467 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 FSHRP23945 695 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 KCNJ5P48544 419 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CRY2Q49AN0 593 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 C2orf27AQ580R0 203 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 SMARCD3Q6STE5 483 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
COL1A1-201ENST00000225964 DEFB119Q8N690 84 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 PCED1BQ96HM7 432 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-201ENST00000225964 DNAJC28Q9NX36 388 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CHP2O43745 196 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 GATBO75879 557 aaKnown RBP13.1□□□□□ -0.31
COL1A1-201ENST00000225964 TNFP01375 233 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 NELFEP18615 380 aaKnown RBP13.1□□□□□ -0.31
COL1A1-201ENST00000225964 FOLH1Q04609 750 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms