RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCDC160A6NGH7 325 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 INSIG1O15503 277 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ACSL4O60488 711 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 RFPL2O75678 378 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 MYF6P23409 242 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ADARP55265 1226 aaKnown RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 SETMARQ53H47 684 aaPredicted RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 TMTC4Q5T4D3 741 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 GAREM2Q75VX8 874 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 SPRED1Q7Z699 444 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 LGI2Q8N0V4 545 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ADAMTS16Q8TE57 1224 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 FUBP1Q96AE4 644 aaKnown RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 CORO1BQ9BR76 489 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 RNF38Q9H0F5 515 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ASAH2Q9NR71 780 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 MED16Q9Y2X0 877 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 EPOPA6NHQ4 379 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 IFRD1O00458 451 aaPredicted RBP24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 MT-CO1P00395 513 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 CDH2P19022 906 aaPredicted RBP24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 CR2P20023 1033 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 CDK9P50750 372 aaKnown RBP24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 FOXA1P55317 472 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 AARS2Q5JTZ9 985 aaKnown RBP24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 ARHGAP22Q7Z5H3 698 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 RBM23Q86U06 439 aaKnown RBP24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 TMEM125Q96AQ2 219 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 DPP7Q9UHL4 492 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 HCFC2Q9Y5Z7 792 aa24.62■■□□□ 1.53
RUNDC3A-201ENST00000225441 A0A087WXM4 84 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 UBA6A0AVT1 1052 aaPredicted RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ZNF701M0R085 212 aaPredicted RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 GIPC1O14908 333 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 HNRNPA1P09651 372 aaKnown RBP eCLIP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 LINC00032P0C843 101 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 PKMP14618 531 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 LPOP22079 712 aaPredicted RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 FMO4P31512 558 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 SLC11A2P49281 568 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 KCNQ1P51787 676 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 OXCT1P55809 520 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ERVK-8P63133 956 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ATP6AP1Q15904 470 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 FXNQ16595 210 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 UGT3A1Q6NUS8 523 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 EP400NLQ6ZTU2 488 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 GLT6D1Q7Z4J2 308 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 PROSER1Q86XN7 944 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 TBC1D21Q8IYX1 336 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ADGRG5Q8IZF4 528 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 MYO1HQ8N1T3 1032 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 PNPLA1Q8N8W4 532 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 MRPS31Q92665 395 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 NSUN5Q96P11 429 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 SLC39A3Q9BRY0 314 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 RSL24D1Q9UHA3 163 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ANAPC1Q9H1A4 1944 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ILVBLA1L0T0 632 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 KLHL33A6NCF5 533 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 TRIM64A6NGJ6 449 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 CLDN11O75508 207 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 RPS6KA3P51812 740 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 CYP4F8P98187 520 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 CYTH1Q15438 398 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 CIR1Q86X95 450 aaPredicted RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ERI1Q8IV48 349 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 PLD4Q96BZ4 506 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 ZNF382Q96SR6 550 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 KLF16Q9BXK1 252 aaPredicted RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 YTHDF1Q9BYJ9 559 aaKnown RBP24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 PCTPQ9UKL6 214 aa24.61■■□□□ 1.53
RUNDC3A-201ENST00000225441 OBSL1O75147 1896 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 FAM234BA2RU67 622 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 GOLGA8CPA6NN73 597 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 H7C0S8 307 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 PPP6CO00743 305 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 ARPC2O15144 300 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 SNX2O60749 519 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 SLC22A3O75751 556 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 RASAL1O95294 804 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 OLFM2O95897 454 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 NFYCQ13952 458 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 PTPRCAPQ14761 206 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 TXNDC8Q6A555 127 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 CHST9Q7L1S5 443 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 OR4K2Q8NGD2 314 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 ADGRE3Q9BY15 652 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 HCFC1R1Q9NWW0 138 aa24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 TRMT6Q9UJA5 497 aaKnown RBP24.6■■□□□ 1.53
RUNDC3A-201ENST00000225441 ATG2AQ2TAZ0 1938 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 LRRC14BA6NHZ5 514 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SOCS2O14508 198 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 TRMUO75648 421 aaKnown RBP24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 MBL2P11226 248 aaPredicted RBP24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 HTR1EP28566 365 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 CCT8P50990 548 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 EPHA5P54756 1037 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 IL2P60568 153 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 TSNQ15631 228 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms