RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PRMT9Q6P2P2 845 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 SPATA19Q7Z5L4 167 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TRPV3Q8NET8 790 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 LKAAEAR1Q8TD35 194 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 BIRC7Q96CA5 298 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MYRFLQ96LU7 910 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 HAUS8Q9BT25 410 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 AGPAT4Q9NRZ5 378 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PTTG2Q9NZH5 202 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PRSS21Q9Y6M0 314 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TET1Q8NFU7 2136 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ILVBLA1L0T0 632 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 AQP12BA6NM10 295 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 SMAD6O43541 496 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 SNAP29O95721 258 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 RCAN2Q14206 197 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 AP5B1Q2VPB7 878 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ADGRF1Q5T601 910 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MBOAT1Q6ZNC8 495 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ZBTB46Q86UZ6 589 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 AQP12AQ8IXF9 295 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TMEM199Q8N511 208 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CLHC1Q8NHS4 586 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 EPB41L1Q9H4G0 881 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 IPPKQ9H8X2 491 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CLK4Q9HAZ1 481 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TRPM5Q9NZQ8 1165 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CLOCKO15516 846 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TBC1D4O60343 1298 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 MBL2P11226 248 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SELPP16109 830 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 NFKBIAP25963 317 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SPOUT1Q5T280 376 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 GLYATQ6IB77 296 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 GOLGA7Q7Z5G4 137 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 CD99L2Q8TCZ2 262 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 RAET1EQ8TD07 263 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 CENPNQ96H22 339 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 DCUN1D5Q9BTE7 237 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TBCDQ9BTW9 1192 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 CHID1Q9BWS9 393 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TNKS2Q9H2K2 1166 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 AFF4Q9UHB7 1163 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 LEF1Q9UJU2 399 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 A0A1B0GVM2 712 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TMX2-CTNND1H3BSU7 103 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 H7C4K7 107 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TRMUO75648 421 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ALDH7A1P49419 539 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ERVK-8P63133 956 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SMAD3P84022 425 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SP3Q02447 781 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 PTGR1Q14914 329 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SLC44A4Q53GD3 710 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ALG1LQ6GMV1 187 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 LCN8Q6JVE9 175 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 SERPINA9Q86WD7 417 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 CLVS1Q8IUQ0 354 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 TTC30BQ8N4P2 665 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 DUS3LQ96G46 650 aaKnown RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ANKRD60Q9BZ19 345 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ASB8Q9H765 288 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 LTB4R2Q9NPC1 389 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ANAPC2Q9UJX6 822 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ARIH1Q9Y4X5 557 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-201ENST00000221232 PATJQ8NI35 1801 aa14.43□□□□□ -0.1
CNOT3-201ENST00000221232 ACOX3O15254 700 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 B4GAT1O43505 415 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 SLC25A14O95258 325 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CLDN7O95471 211 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 HMGA1P17096 107 aaKnown RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CA8P35219 290 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CSKP41240 450 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CCT8P50990 548 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CLCN7P51798 805 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 IST1P53990 364 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 NKX3-2P78367 333 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 BNIP2Q12982 314 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 GTF2H2Q13888 395 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 BTG3Q14201 252 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 XKR7Q5GH72 579 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 GTF2H2CQ6P1K8 395 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 MILR1Q7Z6M3 343 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 FAM126BQ8IXS8 530 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 APCDD1Q8J025 514 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 RIC8BQ9NVN3 520 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 RSL24D1Q9UHA3 163 aaKnown RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 ANGPTL3Q9Y5C1 460 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 PRRC2BQ5JSZ5 2229 aaKnown RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 KLHL33A6NCF5 533 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 OR7A17O14581 309 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 STX16O14662 325 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 PFDN6O15212 129 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 VPS4BO75351 444 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 PRAMEF1O95521 474 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 HRH2P25021 359 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 HMOX2P30519 316 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms