RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HACD2Q6Y1H2 254 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FAM35AQ86V20 835 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 KCTD4Q8WVF5 259 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ITPKCQ96DU7 683 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FUBP3Q96I24 572 aaKnown RBP eCLIP4.37□□□□□ -1.711e-6■■□□□ 12.9
CHD9-201ENST00000219084 HNRNPABQ99729 332 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 PIF1Q9H611 641 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZBTB26Q9HCK0 441 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SEC14L3Q9UDX4 400 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FZD10Q9ULW2 581 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CCDC88CQ9P219 2028 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SYNDIG1LA6NDD5 238 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FAM159BA6NKW6 160 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CASKO14936 926 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TNFRSF21O75509 655 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CLPXO76031 633 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CYP11A1P05108 521 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 IMPDH1P20839 514 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 BDNFP23560 247 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 AQP4P55087 323 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 VWA5B1Q5TIE3 1220 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 PIK3R6Q5UE93 754 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 QSOX2Q6ZRP7 698 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 KCTD8Q6ZWB6 473 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 PIGZQ86VD9 579 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZC3H7AQ8IWR0 971 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 FAM20CQ8IXL6 584 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 KLHL32Q96NJ5 620 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TMEM209Q96SK2 561 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZFYVE1Q9HBF4 777 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ASAH2Q9NR71 780 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FARSBQ9NSD9 589 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 TRNAU1APQ9NX07 287 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 PDP1Q9P0J1 537 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZNF490Q9ULM2 529 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 BAIAP2Q9UQB8 552 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 RUVBL1Q9Y265 456 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 ARFGEF1Q9Y6D6 1849 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CAPN8A6NHC0 703 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CSPG5O95196 566 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CFL1P23528 166 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 HTR1BP28222 390 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 WNT3AP56704 352 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CYP4F3Q08477 520 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 PPP1R26Q5T8A7 1209 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 EPGNQ6UW88 154 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 NPNTQ6UXI9 565 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CYS1Q717R9 158 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 RASAL3Q86YV0 1011 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CBR4Q8N4T8 237 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 DNAJB3Q8WWF6 145 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 HDAC10Q969S8 669 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 NPAS2Q99743 824 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 MFSD1Q9H3U5 465 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 USP29Q9HBJ7 922 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 POLR1DQ9Y2S0 133 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 IGKV6D-41A0A0C4DH26 115 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 A0A1W2PRG6 482 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GRXCR2A6NFK2 248 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TIPRLO75663 272 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ARHGEF15O94989 841 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 EPORP19235 508 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ATP12AP54707 1039 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CLCQ05315 142 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GRIK2Q13002 908 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SLC1A5Q15758 541 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 WSCD1Q658N2 575 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 THOC7Q6I9Y2 204 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 KLHDC10Q6PID8 442 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ATG14Q6ZNE5 492 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 MSANTD1Q6ZTZ1 278 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 APTXQ7Z2E3 356 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 CYP2U1Q7Z449 544 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TMEM110Q86TL2 294 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 LAPTM4BQ86VI4 370 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 C17orf64Q86WR6 236 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GATAD2AQ86YP4 633 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 NAT8LQ8N9F0 302 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SEMA4DQ92854 862 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 MAGIXQ9H6Y5 334 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SP140LQ9H930 580 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 STARD7Q9NQZ5 370 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ANKRD33BA6NCL7 494 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAGEB17A8MXT2 336 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 EFCAB9A8MZ26 197 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TNFRSF11BO00300 401 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAP3K6O95382 1288 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 YES1P07947 543 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZSCAN5DPP0CG00 497 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NR2C1P13056 603 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PTPRAP18433 802 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PEX2P28328 305 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MC4RP32245 332 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAPK10P53779 464 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MANFP55145 182 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 HNRNPDQ14103 355 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 HEPACAMQ14CZ8 416 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 AP2M1Q96CW1 435 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TBCDQ9BTW9 1192 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 OSBPL2Q9H1P3 480 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms