RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 AMBNQ9NP70 447 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 UBQLN2Q9UHD9 624 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 H0YJX3 145 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 hCG_2039718K7EN88 272 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 AKAP8O43823 692 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 ERN1O75460 977 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 RFPL2O75678 378 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 OR2B3O76000 313 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 RECQL4O94761 1208 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PLATP00750 562 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 CSF2P04141 144 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 COL6A2P12110 1019 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 BMP7P18075 431 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 IRF8Q02556 426 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 GNA13Q14344 377 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 UAP1L1Q3KQV9 507 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 IRAK1BP1Q5VVH5 260 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 RAB12Q6IQ22 244 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 CATSPERGQ6ZRH7 1159 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FAM183BPQ6ZVS7 135 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TRAPPC12Q8WVT3 735 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 RRAGCQ9HB90 399 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 HTRA2O43464 458 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 ZBTB14O43829 449 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PPM1BO75688 479 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 DNTTP04053 509 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 COL6A1P12109 1028 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 AOC1P19801 751 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 UBA1P22314 1058 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 ADCYAP1R1P41586 468 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PRKAG1P54619 331 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 C11orf91Q3C1V1 193 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FOXR2Q6PJQ5 311 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 C1orf186Q6ZWK4 172 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ANKS1BQ7Z6G8 1248 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 SPERTQ8NA61 448 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ATL1Q8WXF7 558 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TRIM43Q96BQ3 446 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 HSFY1Q96LI6 401 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 CORO1BQ9BR76 489 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 VWA7Q9Y334 891 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 M0R233 179 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 INMTO95050 263 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ANXA5P08758 320 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TNNI3P19429 210 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 NOMO1Q15155 1222 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNF181Q2M3W8 571 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 DET1Q7L5Y6 550 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 S100A13Q99584 98 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 C2orf49Q9BVC5 232 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 GLIS2Q9BZE0 524 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 ULBP1Q9BZM6 244 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 HLA-DQA2P01906 255 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FGFR1P11362 822 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 IL7RP16871 459 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PTPN1P18031 435 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 CD72P21854 359 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ATP5C1P36542 298 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 MPP2Q14168 576 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FNDC3BQ53EP0 1204 aaKnown RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 HLA-DQA1Q5Y7H0 255 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZDHHC21Q8IVQ6 265 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNF366Q8N895 744 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PGLYRP2Q96PD5 576 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ADAM2Q99965 735 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FXYD6Q9H0Q3 95 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TNKS2Q9H2K2 1166 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 MARCH2Q9P0N8 246 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ADAMTS6Q9UKP5 1117 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TIMM22Q9Y584 194 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
VCL-201ENST00000211998 ADGRB1O14514 1584 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 TMEM150BA6NC51 233 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 SLC18A1P54219 525 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 MVKQ03426 396 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 CERCAMQ5T4B2 595 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 TMEM198Q66K66 360 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 VSIG10LQ86VR7 867 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 TREML1Q86YW5 311 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 SRFBP1Q8NEF9 429 aaKnown RBP10.33□□□□□ -0.76
VCL-201ENST00000211998 OR10A6Q8NH74 314 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
VCL-201ENST00000211998 PXDNQ92626 1479 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms