RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 GRIA2P42262 883 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MTAPQ13126 283 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 EIF4HQ15056 248 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TWIST2Q8WVJ9 160 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 CDKN2AIPNLQ96HQ2 116 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 LRIG1Q96JA1 1093 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF641Q96N77 438 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 BTBD9Q96Q07 612 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PNPOQ9NVS9 261 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 CHD4Q14839 1912 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TK2O00142 265 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MAN1A2O60476 641 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SASH3O75995 380 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PTGIRP43119 386 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MRPS35P82673 323 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MRPS15P82914 257 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC25A11Q02978 314 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 EPS8Q12929 822 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 DYNC1I2Q13409 638 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 EPHX4Q8IUS5 362 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZCCHC10Q8TBK6 192 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 RAB7BQ96AH8 199 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM79Q9BSE2 394 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 FNDC11Q9BVV2 318 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PRRG4Q9BZD6 226 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PGAP2Q9UHJ9 254 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MAGEA13PA6NCF6 341 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A9O60656 530 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 HLA-EP13747 358 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ATP6V1B1P15313 513 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 HOXB6P17509 224 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A6P19224 532 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A1P22309 533 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A4P22310 534 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ALDH4A1P30038 563 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A3P35503 534 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A5P35504 534 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 WDR5P61964 334 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF155Q12901 538 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 FASTKD3Q14CZ7 662 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TSNQ15631 228 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 CHRNA6Q15825 494 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PPM1JQ5JR12 505 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC9A4Q6AI14 798 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MACC1Q6ZN28 852 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF605Q86T29 641 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF563Q8TA94 476 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 KLHDC7BQ96G42 594 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SMAD5Q99717 465 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 HSD3B7Q9H2F3 369 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 BATF3Q9NR55 127 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 OSER1Q9NX31 292 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 MAT2BQ9NZL9 334 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 COPS7AQ9UBW8 275 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TRIM38O00635 465 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 LAMTOR5O43504 91 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SCN2BO60939 215 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 CYP11A1P05108 521 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ATP1B2P14415 290 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 FECHP22830 423 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 RPL4P36578 427 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 HEPACAMQ14CZ8 416 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 VPS26BQ4G0F5 336 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PLEKHG4Q58EX7 1191 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 GPR141Q7Z602 305 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 BHLHE22Q8NFJ8 381 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 TFB2MQ9H5Q4 396 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 RPRD1BQ9NQG5 326 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 ZDHHC7Q9NXF8 308 aa10.23□□□□□ -0.77
NIPAL3-201ENST00000003912 NAV1Q8NEY1 1877 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 KMOO15229 486 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CNTN5O94779 1100 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 BMP7P18075 431 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 MPSTP25325 297 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 MASP1P48740 699 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CDC73Q6P1J9 531 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 DHDDSQ86SQ9 333 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF229Q9UJW7 825 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 SOCS5O75159 536 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 UBXN7O94888 489 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PFKLP17858 780 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 AGXTP21549 392 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 HNMTP50135 292 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 DEFA1P59665 94 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 DEFA3P59666 94 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TNK2Q07912 1038 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TIGD2Q4W5G0 525 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 LRRC66Q68CR7 880 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC30A9Q6PML9 568 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TPRKBQ9Y3C4 175 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TCRBV21S2A2A0A5A6 115 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF487B1APH4 448 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms