RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Olfr1062Q7TR71 315 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nt5dc1Q8C5P5 467 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PdgfcQ8CI19 345 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zbtb6Q8K088 423 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Coq9Q8K1Z0 313 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 KptnQ8VCX6 430 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc25a3Q8VEM8 357 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fam118aQ91YN1 357 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slco1a5Q91YY5 670 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sh3bp4Q921I6 962 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Arl8bQ9CQW2 186 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Uqcrc1Q9CZ13 480 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Paqr5Q9DCU0 330 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cmtm7Q9ESD6 167 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 AuhQ9JLZ3 314 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 DccP70211 1447 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Smim17A0A504 109 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Man1b1A2AJ15 658 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr1200A2ATJ4 336 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Chrna10B2RX82 447 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mkln1O89050 735 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TtlP38585 377 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pdx1P52946 284 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Polr1dP97304 133 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 AxlQ00993 888 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 BtrcQ3ULA2 605 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr1152Q7TR34 310 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ahsa1Q8BK64 338 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Sdhaf3Q8BQU3 125 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 LaynQ8C351 381 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fem1cQ8CEF1 617 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Armcx6Q8K3A6 301 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Swsap1Q8VCI7 278 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 BollQ924M5 281 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ggt7Q99JP7 662 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pih1d1Q9CQJ2 290 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PompQ9CQT5 141 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hnrnpa0Q9CX86 305 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mdm1Q9D067 708 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PlgrktQ9D3P8 147 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ampd2Q9DBT5 798 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tlr6Q9EPW9 795 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 EefsecQ9JHW4 583 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cdh22Q9WTP5 813 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc7a5Q9Z127 512 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tbc1d25A1A5B6 742 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Prdm15E9Q8T2 1174 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vmn2r93L7N1Z9 857 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dnajb5O89114 348 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 GlrbP48168 496 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Wnt10bP48614 389 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lsm3P62311 102 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Psme2P97372 239 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PomkQ3TUA9 349 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Naf1Q3UMQ8 489 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm8773Q3UQ24 132 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ppp2r2bQ6ZWR4 443 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dsg4Q7TMD7 1041 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tbx10Q810F8 385 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ces2eQ8BK48 559 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc7a4Q8BLQ7 635 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pth2rQ91V95 546 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Scpep1Q920A5 452 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 CmasQ99KK2 432 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cmpk1Q9DBP5 196 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 B4galt4Q9JJ04 344 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 CalcrlQ9R1W5 463 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lbx2Q9WUN8 195 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ric1Q69ZJ7 1422 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nrxn1Q9CS84 1514 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rasgef1aA0A0N4SVR5 498 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 KantrA0A1W2P7I0 76 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tceal7A3KGA4 98 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vmn2r59E9PUT5 865 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cntnap3E9PY62 1287 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr172E9Q8F6 309 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm8871F7AXK2 190 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 FkbplO35450 347 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 GzmgP13366 248 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vcam1P29533 739 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 OcmP51879 109 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Arpc4P59999 168 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 EpycP70186 322 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Atp5a1Q03265 553 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam98aQ3TJZ6 515 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Snx27Q3UHD6 539 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Grid2Q61625 1007 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kcnj11Q61743 390 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Scgb1c1Q7M742 95 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Parp12Q8BZ20 711 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Wdr59Q8C0M0 992 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 BpifcQ8C186 509 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Zc3h10Q8R205 435 aaKnown RBP9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q9CQC3 228 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 ArskQ9D2L1 553 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ccdc3Q9D6Y1 273 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gtf2h2Q9JIB4 396 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kcna10B2RQA1 511 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PrnpP04925 254 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 BgnP28653 369 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms